Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02002 ATGGTGAGAAGTGCTGTAGCAGATCCTCCAAACTTGAAGAAATACGGCGTTCCTGCCTACTCAGTCGCATGGATCCCGCCAAATGTCATCAAATCAGGATTGAATCAAACAACTGGTGAATCTTCTGACAACGCCGACAGCTCCACGCCTCAACCACCCGAGCAGTCCGGCGAGCACTACCTTGCGATCGCCGGTGGTGGTGGTGAAGGCAGCAGTGGTATTCCCAATGCTGTGTTGCTTGCACATTTTGATGACGCTTCTAATTCTCTTTCTGATCAGCCAGTGGGCAAGCTTGGAACTAATTCTGAGTTGCCTTATAGAATGGCACTTCACCCCGGTGGAGAAGGCCTTATTTGTGCGATGCCAAAGGGTTGCAGATGTTTTGAATGGGACCAAAACAAGAGTGCAGAAAATCGTAAGTTAGGCCTCAAGGTTTCTGATAATACACTCAGGAAGTTGGAGGGTGCTGGGCAGCAGTTAGCCCTGGCATTTGACAATGATGGCACTATGCTAGCTGTTGGTGGGGAGGATGGCAACCTGAGGGTAGTCAAGTGGCCTAGCATGGAAATTATTCTCAATTCAACTAAAGATTATTCGACAGTAAAAGACTTACATTTCAGCTCTGATGGTAAACTGCTTGTATCTTTGGGAAGTGGTGGGCCATGCAGAGTTTGGGATGTTTCCTCATCAACGGTCTTAACTTCCTTATCAAGTAAAAATGGTGAGGTTTTTAGCTCTTGCAGATTTTCTCCAATTAATGATGGGACCCATGTCTTGTATATTGCTGGAATGACAGACAAAGTTGGAAGCATTCTGACATGGGATGCAAAAACTGGTGCAAGGATGGGCTCAAAGCATATTATTCGTGATGCAATCTCTGCTTTCAATGTCTCAACTGATGGAAAGTTGGTTGCATGTGGAACACCTTCAGGAGACATTGTGATTGTGAAATCGACAAATATGCAGATTCTGTCAATGATTAAAAAGGCTCACCTCGGCATAGTAACTTCATTAGCTTTCTCCCATGATTCAAGGGTGTTGGCTTCTGTATCCTTTGATTCAAGTGCAAGGGTTACTGTAATTGAGGAGAAGCAGAAAAGTGGAGGATTGAGCTTATGGATTGCCTTACTCTTTATCATACTTGCAATAGCTGCCTACTCCCTGAAACTCCAAGACATCGACAAGTTGAAGTTATCTTTTCTTCAAAATTGA 1212 0.4447 MVRSAVADPPNLKKYGVPAYSVAWIPPNVIKSGLNQTTGESSDNADSSTPQPPEQSGEHYLAIAGGGGEGSSGIPNAVLLAHFDDASNSLSDQPVGKLGTNSELPYRMALHPGGEGLICAMPKGCRCFEWDQNKSAENRKLGLKVSDNTLRKLEGAGQQLALAFDNDGTMLAVGGEDGNLRVVKWPSMEIILNSTKDYSTVKDLHFSSDGKLLVSLGSGGPCRVWDVSSSTVLTSLSSKNGEVFSSCRFSPINDGTHVLYIAGMTDKVGSILTWDAKTGARMGSKHIIRDAISAFNVSTDGKLVACGTPSGDIVIVKSTNMQILSMIKKAHLGIVTSLAFSHDSRVLASVSFDSSARVTVIEEKQKSGGLSLWIALLFIILAIAAYSLKLQDIDKLKLSFLQN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02002 403 Pfam WD domain, G-beta repeat 329 358 IPR001680 GO:0005515
Accr9g02002 403 Pfam WD domain, G-beta repeat 150 182 IPR001680 GO:0005515
Accr9g02002 403 ProSiteProfiles Trp-Asp (WD) repeats profile. 194 235 IPR001680 GO:0005515
Accr9g02002 403 SMART WD40_4 278 317 IPR001680 GO:0005515
Accr9g02002 403 SMART WD40_4 146 184 IPR001680 GO:0005515
Accr9g02002 403 SMART WD40_4 320 360 IPR001680 GO:0005515
Accr9g02002 403 SMART WD40_4 187 226 IPR001680 GO:0005515
Accr9g02002 403 FunFam SEC12-like protein 2 53 365 - -
Accr9g02002 403 Gene3D - 54 367 IPR015943 GO:0005515
Accr9g02002 403 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 12 387 IPR045260 GO:0005085
Accr9g02002 403 MobiDBLite consensus disorder prediction 33 55 - -
Accr9g02002 403 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 91 358 IPR011047 -
Accr9g02002 403 MobiDBLite consensus disorder prediction 33 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02002 160 307 Miscellaneous Gene Families AT5G08390 27.027 8.35e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02002 K14003 - gmx:100786727 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g02002 9 43460967 43467369 Accr9g02002 9 43460967 43467369 ECH