Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01919 ATGGCTGCATCGACGTCTACTGCGGCCTCCGCCAACATCATGCTTGCCATCTTCGAGAAGAAGACCAACTCAATCGATCTTTATCGGCCTCTTCGCAACTACGTCGCTTTCCACTACTCCGAACGCGAGGCTCAGCACATCGAAGATGACCTCCAAACCCTTAAGCAACTCCGTTCCGACCTCGAGCGCCACTCGGACCCTTCCCTCACCGCTCGCCGCGACCTTTTTCAATCCTACTACAGAGCTCTCTGCTTGGTGGAGACCCGTTTCCCCATATCTTCTGACCCAGATCACGTCAATACTCTCAGCTTCGTGTGGTTCGATGCGTTTAAGCCCAAACTGAAGGCAACCCAGCAGAATATTCACCTTGAGAAAGCCGCTGTGTTGTTCAATTTGGGCGCAGTTTATAGTCAAATTGGGTTATCCTATGATCGGAATACTGTTGACGGCCGGAGGCAGGCCTCACACGCGTTTATTGCAGCTGCTGGGTCGTTTGCTTACTTGAGGGATAATGCGGCCATGAAGGCGTCAATTGGGAGTTCCACAACTGTGGATTTGTCTGTTGAGTGCTCAGGAATGTTGGAGAGGTTGATGTTGGCTCAAGCACAAGAGTGCGTGTTTGAGAATACCATTGCAAAAGGAAGCACCCCGGGAGTTTGTGCGAAGATCTCTAGGCAGGTTGGGCTATACTATGAGGAAGCTTTAGCTGCATTGAGCGTTGCACCTCTAAATCAGCATTTTGACAAGTCTTGGTTAGCTCATGTACAGCTAAAGGCTACTTTATTCTTTGGAGAAGCTTGCTATAGATATGGATTAGAGCTACATGAGAAAGAAGAGATAGCAGAGGAGATTGCAAGACTGAAGACTGGGGTTAATGCACTAACCGAAGCAAAGAAAAGCTCAAAGGGTGCCCCTGCACAAATCCTAGATGCGATTAGTAAGTTAGAAGCCAATCTTAACCGAAACCTTGAAAGGGCTGTTAAAGAGAATGATAGAGTTTACCTCATGAGGGTTCCTTCTCCCAGTTCGTTGGCACCTCTTCCTGCTTTTTCTATGGTGAAGCCCATGTCAATGAGTGAAGTGTTGGATGCAAGTAAAGAGAAAATGTTTGCAAGTCTTGTTCCTGATAGCAGCGCAAAATCACTCTCCAGATACACTGAGATGGTTGATGACATTATAAGATCCCAAGCTGAAAAATTGCAACGAGCCAGCGAGTTAACCCGAATAAGGCTAAAGGAAATGGAGCTGCCTGATTCTATTCTTGCTTTGGAAGGAAATTTAACTCTACCTGCACATCTCAAAGAAGATGTGGAGGCCGTGCAGATCAGTGGAGGTCCTGCTGGTTTGGAAGCAGAGTTACAGCAACTTAAGGATCTAAGGAGGGTGAATCAAGAAATGTTGGTCCAGACAGAGGAGCTGTTGCAGAAGGAGGCAAGAGAAGATGCCCAATTCAGAAGCCAATTTGGGACAAAGTGGACTAGGCCTCAATCAAGCACTTTAACAAAAAACTTGCAGGATAGATTAAATAGATTTGCTGGTAACTTGAAGCAAGCTGGAGAAAGTGATGGCCGGATTGAGCGCTCAGTTAGAGAACACGCTGCACTTATGTCTATCCTTGACAGCCGTCCAATTGAATCTGCACTCCCTTCCTTAGCAAGGCCGATAATGTCTCTAGATGCCAATGAAGATGCTATTGTAGGATCCCTCAAGCAGAGCTTGAGGCAACTCGAAACTCTGGGAGCTCAGAGGGCTGGCCTTGAAGATATGCTTAAAGAGATGAGAAGAAAGGATGATATACTACCCAAGTTGATGACGTCAACAGGTTCTCATGAGGATCTTTTCAAGAAAGAGATAACTAAATATGACCATATATGTGAAGAAATAGGTCAAAACATCGATGCACAAGAGCAGTTGTTGCTGCAGATTCAGGATCAAAATGATGCGTTCTCTGCTATCTTTAATCTTGAAGATTACAAAGCTTCACGTGAAAAATGCTACAAGCAGATTGAAGCTGCCATAGCGAAGTATAGAGAAATTAAAGACAACATCAATGAAGGGTTGAAATTTTATGTTACGCTGCAGGATGCAATCACAAATGTAAAGCAGCAGTGCAGTGACTTCATAATGACTAGAAACATCCAGTGCAGGGAAATGATTGAAGATGTCCAGAGACAAGTGGCTGGTCTCAGTTTCCAGGATAACAAAACCACTGCCCCCTCTAATAGTAGCTACCCTTCAATGGGACACCAGTCTCAAAGATCCTATCCACCAGATTCTCGCCCCCAAACCGGATATTATCAGCCGCCGCCGCCGCCGGAACAGCCATCAGCAACTGGGTATGGTCAACCCCCTCCATATGGTGGTTCTGCACATCAGCCGCCTCCTCCGTACCACATGCCACACGCATCAGCTAGTCCATATCCTCAGCAGCAACCAGCAGGCCATGACTATGGCCAACCTGCATATCCTGGATGGCGTGGTCCATACTATAACGCTCATTCTCAACAACCTTCCTCGGTTCCTCGGCCTCCTTACACTATTCCAGGTCCATATCCCCCTGGCTTCTATAAGCAACAATAG 2580 0.4663 MAASTSTAASANIMLAIFEKKTNSIDLYRPLRNYVAFHYSEREAQHIEDDLQTLKQLRSDLERHSDPSLTARRDLFQSYYRALCLVETRFPISSDPDHVNTLSFVWFDAFKPKLKATQQNIHLEKAAVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAYLRDNAAMKASIGSSTTVDLSVECSGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALSVAPLNQHFDKSWLAHVQLKATLFFGEACYRYGLELHEKEEIAEEIARLKTGVNALTEAKKSSKGAPAQILDAISKLEANLNRNLERAVKENDRVYLMRVPSPSSLAPLPAFSMVKPMSMSEVLDASKEKMFASLVPDSSAKSLSRYTEMVDDIIRSQAEKLQRASELTRIRLKEMELPDSILALEGNLTLPAHLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQEMLVQTEELLQKEAREDAQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAGESDGRIERSVREHAALMSILDSRPIESALPSLARPIMSLDANEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMRRKDDILPKLMTSTGSHEDLFKKEITKYDHICEEIGQNIDAQEQLLLQIQDQNDAFSAIFNLEDYKASREKCYKQIEAAIAKYREIKDNINEGLKFYVTLQDAITNVKQQCSDFIMTRNIQCREMIEDVQRQVAGLSFQDNKTTAPSNSSYPSMGHQSQRSYPPDSRPQTGYYQPPPPPEQPSATGYGQPPPYGGSAHQPPPPYHMPHASASPYPQQQPAGHDYGQPAYPGWRGPYYNAHSQQPSSVPRPPYTIPGPYPPGFYKQQ 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01919 859 SMART BRO1_2 13 397 IPR004328 -
Accr9g01919 859 MobiDBLite consensus disorder prediction 787 802 - -
Accr9g01919 859 Gene3D alix/aip1 in complex with the ypdl late domain 375 653 - -
Accr9g01919 859 Coils Coil 576 596 - -
Accr9g01919 859 MobiDBLite consensus disorder prediction 762 779 - -
Accr9g01919 859 Coils Coil 625 645 - -
Accr9g01919 859 Gene3D alix/aip1 like domains 421 702 - -
Accr9g01919 859 Coils Coil 449 476 - -
Accr9g01919 859 MobiDBLite consensus disorder prediction 730 761 - -
Accr9g01919 859 Coils Coil 44 64 - -
Accr9g01919 859 MobiDBLite consensus disorder prediction 730 859 - -
Accr9g01919 859 Pfam ALIX V-shaped domain binding to HIV 429 713 IPR025304 GO:0005515
Accr9g01919 859 Coils Coil 309 332 - -
Accr9g01919 859 CDD V_Alix_like_1 375 711 - -
Accr9g01919 859 CDD BRO1_Alix_like_1 14 369 - -
Accr9g01919 859 Pfam BRO1-like domain 14 392 IPR004328 -
Accr9g01919 859 Coils Coil 277 297 - -
Accr9g01919 859 Gene3D alix/aip1 like domains 8 374 IPR038499 -
Accr9g01919 859 PANTHER PCD6 INTERACTING PROTEIN-RELATED 11 853 - -
Accr9g01919 859 ProSiteProfiles BRO1 domain profile. 12 407 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01919 Accr-Chr9 41387724 41395043 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01919 K12200 - gmx:100802927 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01919 9 41387724 41395043 Accr9g01919 9 41387724 41395043 ECH