Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01884 ATGGCTCTGGTTCCTGAGTTTCGTTTCCTCTTGATTTCTCAACTTCTACTTGTTTCAGCTAGCTATGGACACGCCAGCCATGACAAGTGTCCAAGATCTTTTAAGTGTGGAAAAATTGGAAGCATCCAGTTCCCTCTCACCAAAGCAGAAATGCCAGACTGTGGCTTCATGATGGTTCATAACTGTGATGATCCAAATCGAGATTCAACCAAAACGATTGAGCTTGACAAGAGTGTGAAAAAAATCTTGAACCTTACCGGCGTTTTTCCACAGCTACATATGATTGAGGTTTTCAACCCTGATTTACACACTCGCTTACAATCCAATGGTTCTTGTGAGGCCTTCAATAAGAGTTTTAGTATTCCTGCTAAATCTCCTGTGATTTCTTTTTATATCAAATACAATATAACACTCTTTAAATGCCCCCACCATTTCAATGTCAGCCACCCAACTGGTTTTATTAAACATAACTGTGATGGTTTTGATATCTATCATTACAGTGGAGACGCTAATCGTCCTAATTCTGTCCAGCAAAGCTGTTTCTCAGCATGTTCATCTCTTGTTCTTCCCAAGAAAGACCTGCCTGATACCACAGACCTTCAATCCTTCTTATCTGCTCATATGATGCTTGAGGTACGACTATCAGACGACTGTGATAAGTGTTACAACCACCAAGGAGGCCAGTGTAAACTTGACCACAACAAGTTTTACTGCGACAAAGCTCCACCTGATCCAAGTAAGTTTTGGAAGCTGGCGCTGGGACTTGGGATAGGTCTATTTGCTGTAGTTTTGTGCATTTTGATAATTTGGCAGCGCCTTCAAAAGTATTACAAAAAGCATCCATCTTCAGAAGTTCAATTACAATTAGCAAGCAATTATGCAATTGATCCGTGCCGCAAAGCAGACCCAGAAAGTGGCAGAATCTACTTGAGGGTACCCCTCTTCTCCTACGAGGAGCTTAAGAAAGCAACAAATAACTTTGATCGTTCAAATGAATTGGGAAATGGAGGCTTTGGCTCTGTTTACTATGGAAAGCTCCAAGATGGACGTGAAGTTGCAGTTAAGTTCTTATATGACCACAACTATAGGCGATTCGAACAATTCATGAACGAAATTGAGATGCTAACTCGGTTGCACCATCGAAACCTTGTGTCCCTATATGGCTGCACTTCATGCCGTAGCCATGAACTCCTCCTTGTGTATGAATTTGTTCCAAACAAAACAGTCTCATACCATCTCCATGACAAACCAGCAAACCAAGGTTTATTATTACCATGGTCTGCAAGAATCAAAATTGCCATAGAAACTGCAACTGCATTAGCTTTCCTCCATGCTTCTGGTACCATTCATAGAGATGTCAAAACAAACAACATCCTGCTTGACAACAACTTCTCAGTTAAGGTTGCTGATTTCGGGCTTTCGAGGTTGTTCCCTGATGATGTCACCCATGTTTCCACTGCACCACAAGGGACCCCTGGTTATGTTGATCCAGATTATTACCAGTGTTACCAGCTTACTAGCAAAAATGATGTGTATAGCTTCGGGGTTGTGCTTATTGAGCTGATATCTTCTATGCAAGCAGTCGATATGTGCAGGCCTAGAGATGAGATTAATCTAGCAAATTTCGCTGTGAATAAGATTCAGAAAAGTGCATTTGAGGAGTTGGTTGATCCTTCTCTTGGTTTTGAGACAGATAGCGAGGTTAGGAGGATGATAATTTCAGTGGCAGAGCTGGCTTTCCAGTGTTTACTGAAGGAAAAGGATTTGAGACCTTCCATGGATGAGGTTTTGGAGATTTTGAGGAGAATAGAGGGTGGGAATGAGGAGTTTAATGATGTTGTTGAAGAAGTTGATGTTGATGTTAATGGTGCTATTGGTATATCACATAGTGGTCCTTTACATTCTTCATCCTCACCACCTTCACCAGATTGTAATGAGATTGGATTGCTGAAAATTATCAAGTCACTGCCTTCACCTCTAGTGTGA 1986 0.4134 MALVPEFRFLLISQLLLVSASYGHASHDKCPRSFKCGKIGSIQFPLTKAEMPDCGFMMVHNCDDPNRDSTKTIELDKSVKKILNLTGVFPQLHMIEVFNPDLHTRLQSNGSCEAFNKSFSIPAKSPVISFYIKYNITLFKCPHHFNVSHPTGFIKHNCDGFDIYHYSGDANRPNSVQQSCFSACSSLVLPKKDLPDTTDLQSFLSAHMMLEVRLSDDCDKCYNHQGGQCKLDHNKFYCDKAPPDPSKFWKLALGLGIGLFAVVLCILIIWQRLQKYYKKHPSSEVQLQLASNYAIDPCRKADPESGRIYLRVPLFSYEELKKATNNFDRSNELGNGGFGSVYYGKLQDGREVAVKFLYDHNYRRFEQFMNEIEMLTRLHHRNLVSLYGCTSCRSHELLLVYEFVPNKTVSYHLHDKPANQGLLLPWSARIKIAIETATALAFLHASGTIHRDVKTNNILLDNNFSVKVADFGLSRLFPDDVTHVSTAPQGTPGYVDPDYYQCYQLTSKNDVYSFGVVLIELISSMQAVDMCRPRDEINLANFAVNKIQKSAFEELVDPSLGFETDSEVRRMIISVAELAFQCLLKEKDLRPSMDEVLEILRRIEGGNEEFNDVVEEVDVDVNGAIGISHSGPLHSSSSPPSPDCNEIGLLKIIKSLPSPLV 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01884 661 Gene3D Transferase(Phosphotransferase) domain 1 404 614 - -
Accr9g01884 661 Pfam Protein tyrosine and serine/threonine kinase 330 599 IPR001245 GO:0004672|GO:0006468
Accr9g01884 661 ProSiteProfiles Protein kinase domain profile. 327 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01884 661 SMART serkin_6 327 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01884 661 FunFam Wall-associated receptor kinase-like 20 404 612 - -
Accr9g01884 661 SUPERFAMILY Protein kinase-like (PK-like) 308 600 IPR011009 -
Accr9g01884 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 643 IPR044652 GO:0004672
Accr9g01884 661 Gene3D Phosphorylase Kinase; domain 1 300 403 - -
Accr9g01884 661 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01884 Accr-Chr9 40748426 40751168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01884 32 660 Receptor kinase-like Gene Family AT1G25390 45.141 1.17e-163 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr9g01884 PK_Tyr_Ser-Thr 6.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01884 - - gmx:100791822 685.256