Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01302 ATGAATCCCTTCTCTTCAGGGACGCGCTTGAGGGACATGATTCGGGCCATACGTGCCTGCAAAACAGCAGCAGAAGAACGTGCTGTTGTGAGAAAAGAGTGTGCTGCCATTCGTGCTGCAATTGATGAAAATGATCGAGACTATAGGCATCGGAATCTGTCTAAGCTTATGTTCATACACATGCTTGGCTACCCAACACATTTTGGTCAAATGGAATGCCTCAAGTTGATTGCGTCTCCTGGATTTCCAGAGAAGAGAATAGGTTATCTTGCCCTTATGTTGCTTCTTGATGAAAGACAAGAGGTTCTTATGTTGGTCACAAATTCATTGAAACAGGATCTTAATCACACAAATCAGTATATTGTTGGACTTGCACTTTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGGTTGCTGCAATTTCGAGACCCAAATGTCCGCAAAAAGGCAGCATTATGTGCAATAAGAATCATAAAGAAGGTTCCAGACTTGGCAGAAAATTTTATTAATTCTGCTGCTGCGTTACTTAGGGAGAAGCATCATGGAGTTTTGATCACCGGGGTTCAGCTCTGTACAGAACTGTGTAAAGTTAGTGCAGAAGCCCTTGAATACTTTAGAATGAAATGCACAGAGAGTGTGGTCAGAAGTCTCAAGGACCTAGTTAACAGTCCTTATGCACCAGAATATGACATTGCTGGCATCACTGATCCTTTCCTCCATATTAGATTGCTTAAGCTTTTGCGAGTACTGGGTGAAGGCAATGCTGATGCTAGTGACTTAATGAATGACATACTTGCGCAGGTGGCTACCAAGACTGAGTCAAATAAAGTTGCAGGAAATGCCATTTTATATGAAAGTGTTCAAACAATCATGAGTGTTGAAGATAGTGGTGGCCTGCGTGTGCTTGCCATCAATATCCTTGGAAGATTCTTGTCAAACAGTGACAACAATATTAGGTATGTGGCATTAAACATGCTGATGAAGGCTGTAACAGCTGATGCTCAAGCAGTGCAGAGGCATCGTGCAACTATTCTGGAATGTGTAAAGGATTCAGATGCTTCAATTCAGAAAAAAGCTCTTGAACTTGTTTACGTTTTGGTGAATGAAAGTAATGTGAAGCCCTTAACAAAAGAGCTAATTGACTATCTGGAAGTCAGTGATCAAGAATTCAGGGCCGACCTTACTGCCAAAATTTGCTCTATAGTTTCCGAGTTTTCTCCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTTTCTGAGGCTGGAAACTTTGTAAAGGATGAAGTATGGCATGCATTAATTGTTGTGATAACCAATGCTTATGACCTTCACGGCTACACAGTAAGAGCATTATACAGAACTTTGCAAACTTCTGCCGAACAGGAAAGTCTTGTTCGAGTTGCAGTGTGGTGCATTGGAGAATATGGAGATATTTTAGTTAAGAATGTTGGAATGCTTGACATAGAAGAACCAATAGTGGTGACTGAATCAGATGCTGTGGATATTCTCGAGATGGTTATAAAACAACACACATCAGATCTTACCACAAAAGCTATGGCTTTGATTGCTCTGTTGAAACTTAGTTCACGTTTTCCATCTTGTTCAGAGAGTATCAGGAATATAATCACTCAGTATAAAGGAAACCTGGTTCTTGAATTGCAGCAAAGATCTATAGAATTCAATAAAGTTCTTGCAAATCATCAAAATATTAGTTCTGCACTTGTAGAAAGGATGCCAGTTTTAGATGAGGCAACTTTCATTGGTAGGAAAGCTGGTTCTATGCTGGGCACAGCTTCAACTCCAAGAGGACCTTCAGTTAATATTCCAAATGGAGTTGCTAAACCTTCTGTGGCTCCTCTTGTGGATCTGCTTGATTTAAGCTCCGATGATGTTCCTGCACCTAGCCCATCTGGTGGTGATCTTCTTCAAGACCTTCTTGGTGTTGATTTGCCACCAGCATCACAACAGCTGGGTTCTGGTCAAGCTCCAAAAAGTGGTACCGATGTTCTTTTGGATCTTTTGTCTGTTGGATCACCTTCTGTGCCTCCTATGTCACCTTCTGCACTAAGCCTCTCGTCTACAACAGACATCTTATCCTCCAGTATGAATAACAAAACACCAACTTCACCACTGGATGATCTCACGTCTCTCTCACTTTCTGCTGGAGCTGCTCCTATGATGGATTTGTTGGATGGGTTGACCTCCAGTCCTCCAACAGAAAACAATGGACTGGTTTATCCATCTATAACTGCATTTGAGAGCAGCTCCTTGAGGGTGACATTCAATTTCTCCAAAGAAACAGGAAAACCACAAACAACAATTATTCAAGCTGCCTTTACGAATTTGACTTCTAATATATATACAGATTTTATTTTCCAGGCAGCTGTTCCTAAGTTTCTTCAATTGCACTTAGATCCGGCTAGTGGCCATGCTCTACCTGCTAGTGGTGATGGCTCCATCACACAAACATTGAGAGTTACGAACACCCAACATGGAAAGAAAAATCTTATCATGCGTATGAGGATAGCGTACAAGGTAAATGGCAAGGATACACTAGAAGAAGGACAAATCAACAACTTTCCTCGTGAGTTAGGAGGCTAA 2637 0.4149 MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRAAIDENDRDYRHRNLSKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLALMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNVRKKAALCAIRIIKKVPDLAENFINSAAALLREKHHGVLITGVQLCTELCKVSAEALEYFRMKCTESVVRSLKDLVNSPYAPEYDIAGITDPFLHIRLLKLLRVLGEGNADASDLMNDILAQVATKTESNKVAGNAILYESVQTIMSVEDSGGLRVLAINILGRFLSNSDNNIRYVALNMLMKAVTADAQAVQRHRATILECVKDSDASIQKKALELVYVLVNESNVKPLTKELIDYLEVSDQEFRADLTAKICSIVSEFSPEKIWYIDQMLKVLSEAGNFVKDEVWHALIVVITNAYDLHGYTVRALYRTLQTSAEQESLVRVAVWCIGEYGDILVKNVGMLDIEEPIVVTESDAVDILEMVIKQHTSDLTTKAMALIALLKLSSRFPSCSESIRNIITQYKGNLVLELQQRSIEFNKVLANHQNISSALVERMPVLDEATFIGRKAGSMLGTASTPRGPSVNIPNGVAKPSVAPLVDLLDLSSDDVPAPSPSGGDLLQDLLGVDLPPASQQLGSGQAPKSGTDVLLDLLSVGSPSVPPMSPSALSLSSTTDILSSSMNNKTPTSPLDDLTSLSLSAGAAPMMDLLDGLTSSPPTENNGLVYPSITAFESSSLRVTFNFSKETGKPQTTIIQAAFTNLTSNIYTDFIFQAAVPKFLQLHLDPASGHALPASGDGSITQTLRVTNTQHGKKNLIMRMRIAYKVNGKDTLEEGQINNFPRELGG 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01302 878 Pfam Adaptin C-terminal domain 759 873 IPR008152 GO:0006886|GO:0016192
Accr9g01302 878 Pfam Adaptin N terminal region 27 578 IPR002553 GO:0006886|GO:0016192|GO:0030117
Accr9g01302 878 Gene3D - 2 594 IPR011989 -
Accr9g01302 878 Gene3D - 744 876 - -
Accr9g01302 878 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 11 864 - -
Accr9g01302 878 FunFam AP-1 complex subunit gamma 2 594 - -
Accr9g01302 878 SUPERFAMILY ARM repeat 25 591 IPR016024 -
Accr9g01302 878 SMART alpha_adaptinc2 753 873 IPR008152 GO:0006886|GO:0016192
Accr9g01302 878 FunFam AP-1 complex subunit gamma 747 876 - -
Accr9g01302 878 PIRSF AP1_gamma 6 876 IPR017107 GO:0005794|GO:0016192|GO:0030121
Accr9g01302 878 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 756 873 IPR008153 -
Accr9g01302 878 SUPERFAMILY Clathrin adaptor appendage domain 735 875 IPR013041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01302 Accr-Chr9 17375989 17390285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01302 K12391 - gmx:100802164 1351.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01302 9 17375989 17390285 Accr9g01302 9 17375989 17390285 ECH