Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01262 ATGAACTCTGATGAAAAAGCAGCTGGGATTTTATCTTCCAAAATTGTTGATTCAAGGAGTAGTGGGTGTCAGCTGGAAACTTGTTGTCCAGTTTCTATGAAGCAAGCTAGCCAGTACTCCATAGTTCATAAAGTTACTCAGTGTTCACCTTCTCCTGTGCTTTCTTTTGTGGAGAGAGAGCCTCAAGATACAGAAACTTCTCATGTAATAGCTGTTGATTCAGATCATGAATGCCCAAAGTCAGGAAATTTGTCAACTTCATCTAATACCATGCGAGACATACATATTTCAATGAGGTTGATGGAGCACTTTCTTGAGCTTGCTAAAGAAAATACAGAGAAGGATCTGGAAACATGTGGTATACTAGGTGCCTTCCTTGATAAGGGAACCCTCTACATGACCACTCTGATTATACCGAAACAAGAATCAACTTCCAGCTCTTGTCAGGCTACAAATGAGGAGGAAGTTTTTGCAATTCTAAATGAAAGATCCCTTTTGCCTGTGGGATGGATCCATACCCATCCTTCTCAAAATTGTTTCATGTCATCAGTGGATCTGCATACTCAATATTCTTATCAGGTAATGGTTCCTGAGGCTTTTGCCATTGTACTGGCTCCTACAGATACCTCAAGGAGCTGTGGATTGTTTCGGATAACTGACCCTGATGGAATGAGTATTCTACAAGGTTGCCCAGAGACAGGATTTCATCCACACAAAGACCCAGATAATGGGAGTCCCATGTATGAGCGATGCTCCAATGTCTACAAGAACTCCAATCTGAGGTTTGAAATCTTTGACTTGCGCTGA 807 0.4151 MNSDEKAAGILSSKIVDSRSSGCQLETCCPVSMKQASQYSIVHKVTQCSPSPVLSFVEREPQDTETSHVIAVDSDHECPKSGNLSTSSNTMRDIHISMRLMEHFLELAKENTEKDLETCGILGAFLDKGTLYMTTLIIPKQESTSSSCQATNEEEVFAILNERSLLPVGWIHTHPSQNCFMSSVDLHTQYSYQVMVPEAFAIVLAPTDTSRSCGLFRITDPDGMSILQGCPETGFHPHKDPDNGSPMYERCSNVYKNSNLRFEIFDLR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01262 268 Gene3D Cytidine Deaminase, domain 2 72 268 - -
Accr9g01262 268 ProSiteProfiles MPN domain profile. 84 224 IPR037518 -
Accr9g01262 268 SMART pad1_6 93 221 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr9g01262 268 PANTHER AMSH-LIKE PROTEASE 10 268 - -
Accr9g01262 268 FunFam AMSH-like ubiquitin thioesterase 2 74 268 - -
Accr9g01262 268 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 91 197 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr9g01262 268 CDD MPN_AMSH_like 92 268 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Accr9g01262 268 SUPERFAMILY JAB1/MPN domain 94 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01262 Accr-Chr9 16563608 16566769 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01262 K11866 - gmx:100807282 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01262 9 16563608 16566769 Accr9g01262 9 16563608 16566769 ECH