Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01222 ATGTTGGGGAGCAACAACGGAAATACCGTTCTTCCTGTTTTCTTGGATGATGCTCACATGCATTATCAAGCTAATGCAGCAAATCAACTGCAGTTGTTTGGAAACTTACCAGCCGGGTGCAGTGTTGATCCGGTTAATTACTTTGGAAATGAGCATATTAGTTCTATGGTTCAGCCAAGCAGACAAACCAGGGAAATAGATGACATGTCCAAGCAGCAAAAGCTTCAGATCTCCTTAAATTACAACTTCGGTCAAGATGAACCTGATCGATCAGCAAGCATTCCAAACCCAAACCCAAATCCCAACCATGTGTCAACAGGATTGAGGTTGTCTTATGATGATGATGAGCGTAACTCATCCGTGACTTCTGCAAGTGGAAGCATGACCGGTACGCCTCCGATCATATTATCACTTGGTGACAATATTAGAACTGAGCTTAATAGGCAGAAGCAAGAATTGGATCAGTATATAAAACTTCAGAAGGAACAATTGTCTAAAGGATTGAGAGATATGAAACAAAAGCACACGGCTTCTCTTCTTACTGCCATTGACAAAGGCATAAGCAAGAAGCTAAGGGAAAAAGAAGTGGAGGTAGAGAACATGAACCGAAAAAACCGAGAACTAGCAGAGAAAATAAAGCAGGTGGCTTTGGAAGCACAAAACTGGCATTACAGAGCAAAGTACAACGAGTCAGTTGTGAATGTTCTAAGGAACAATCTCCAGCAGGCTATCTCGCAGGGAGTTGAACAAGGGAAGGAAGGGTTTGGGGACAGTGAGGTTGATGATGCCGCCTCAACCATTGACCCCAATAACTTGCTGAGCTGCCATGGTGTGACGATGAAATCTGCTGGGAAGAAGCAGCAAGGCTCGGAGGAACATATGTTTTGCAGGGCTTGCAAGGTGAAGGAGGTTTCAATGTTGTTAATGCCTTGTAGGCACTTGTGCTTGTGTATGGACTGTGATGCTTTTCTCAATGTTTGTCCTGTATGCCAAATGATGAAATCTGCTAGCGTCCAAGTGTTTCTTTCTTAA 1032 0.4341 MLGSNNGNTVLPVFLDDAHMHYQANAANQLQLFGNLPAGCSVDPVNYFGNEHISSMVQPSRQTREIDDMSKQQKLQISLNYNFGQDEPDRSASIPNPNPNPNHVSTGLRLSYDDDERNSSVTSASGSMTGTPPIILSLGDNIRTELNRQKQELDQYIKLQKEQLSKGLRDMKQKHTASLLTAIDKGISKKLREKEVEVENMNRKNRELAEKIKQVALEAQNWHYRAKYNESVVNVLRNNLQQAISQGVEQGKEGFGDSEVDDAASTIDPNNLLSCHGVTMKSAGKKQQGSEEHMFCRACKVKEVSMLLMPCRHLCLCMDCDAFLNVCPVCQMMKSASVQVFLS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01222 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 343 IPR013083 -
Accr9g01222 343 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 63 340 IPR017066 -
Accr9g01222 343 PIRSF SBP1_RNase_bind 1 343 IPR017066 -
Accr9g01222 343 MobiDBLite consensus disorder prediction 83 107 - -
Accr9g01222 343 MobiDBLite consensus disorder prediction 83 132 - -
Accr9g01222 343 Coils Coil 191 218 - -
Accr9g01222 343 FunFam Baculoviral IAP repeat containing 7 305 341 - -
Accr9g01222 343 CDD mRING-HC-C3HC5_CGRF1-like 295 330 - -
Accr9g01222 343 Coils Coil 143 163 - -
Accr9g01222 343 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 277 342 - -
Accr9g01222 343 MobiDBLite consensus disorder prediction 117 132 - -
Accr9g01222 343 ProSiteProfiles Zinc finger RING-type profile. 296 331 IPR001841 -
Accr9g01222 343 Pfam Zinc finger, C3HC4 type (RING finger) 294 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01222 Accr-Chr9 15881431 15889264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01222 295 343 Miscellaneous Gene Families AT2G21380 34.694 2.11e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01222 K19042 - mnt:21410357 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01222 9 15881431 15889264 Accr9g01222 9 15881431 15889264 ECH