Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01206 ATGAAGAGAAACACAAGCAATTCTCTGCTCTTTTTCATCTTCTTACTGATTCTTGTCTTCTTGACTTCTTGTGTCATTTCTGTGGAACCAAGGAAGAGTCACAACTGGGAAAGAAAACCTCGTAAACATCATGGCCATGGCCATTCTCAAAGTCCTGCCTCATCTCCAGCTCAAACTCAAACCTTCACTTTTGATGTTCTGTCTTTTGGAGCCAAGGCCAATGAGATTTCTGATGATTCCAAGGCGCTTTTAGCAGCATGGGAAGCTGCCTGCAAAGTTGGTGGTACAGTGAAAATTCCAGCAGAACACAGATTCCTAATCAAGCCCATTACTTTACAAGGCCCTTGTATGCCTCACCTTACTCTTCAGATAGATGGGACCCTAATGGCTCCTCCTGCAATATCTTCCTGGCCAAAATCCAGTTTATTTCAATGGATAAATTTCAAAAGCATCCACAGCTTCACCCTCCAAGGTTCTGGCACCATTGATGGCCAAGGCTTTAACTGGTGGACCTCCTCACAGAATTATCCTATGCAGAAGAAGGGATATTATCCCGAACAGATTCCAGTCATGAAGCCGACTGCTGTAAGGTTTTATTCTAGCAATGATGTAACAGTTCGTGATATCAAAATCATAAACAGTCCTCTATGTCATCTAAAGTTCGACAATTCAAAAGGGATCAAAGTGAATAACATTACAATATCTTCCCCAGAAAATAGCCAAAACACCGATGGTATTCACTTACAGAACTCACAGGATGCAGAGATCCAACGTTCCAACATTGCAAGTGGAGATGACTGTGTTTCCATCCAAACTGGTTGCTCAAATATTCATATTCACCATATAAACTGTGGCCCAGGACATGGCATAAGCATAGGAGGATTAGGAAAAGACAGAAGTGTGGCATGTGTTTCCAACATCATGGTTAACGATGTCTCAATGCAAAACACACTATATGGAGTAAGGATCAAAACATGGCAGGGTGGTATTGGGATGGTAAAGAATGTGTCATTCACAAGAGTCCAAGTGGAAGATGTGAAGAGTCCAATAACGGTGGACCAATACTACTGTGACAAGCAAGTGTGGAAGAACCAGACAGGAACAGTGGTAATTTCTGGAGTGAAGTTTGATAAAATTTATGGGACTTATGCATTTCAACCAATACACATAGCTTGTAGCAATTCAATACCTTGCACTGACCTTGATCTAACAGATATTCAGCTTAGGCCATCACAGAAGTATAGTGGTTTTTTTCAACAAGCTTTCTGTTGGAACTCTTATGGAAAATCTCAAGGCCCCATGATGCCTTCAAACATTGATTATTGCGTGAGAAGTGGTGGCGGTTATATCAAGAAGATATCTAGGTCTCATGATAGTGTGTGTTACTAA 1389 0.4125 MKRNTSNSLLFFIFLLILVFLTSCVISVEPRKSHNWERKPRKHHGHGHSQSPASSPAQTQTFTFDVLSFGAKANEISDDSKALLAAWEAACKVGGTVKIPAEHRFLIKPITLQGPCMPHLTLQIDGTLMAPPAISSWPKSSLFQWINFKSIHSFTLQGSGTIDGQGFNWWTSSQNYPMQKKGYYPEQIPVMKPTAVRFYSSNDVTVRDIKIINSPLCHLKFDNSKGIKVNNITISSPENSQNTDGIHLQNSQDAEIQRSNIASGDDCVSIQTGCSNIHIHHINCGPGHGISIGGLGKDRSVACVSNIMVNDVSMQNTLYGVRIKTWQGGIGMVKNVSFTRVQVEDVKSPITVDQYYCDKQVWKNQTGTVVISGVKFDKIYGTYAFQPIHIACSNSIPCTDLDLTDIQLRPSQKYSGFFQQAFCWNSYGKSQGPMMPSNIDYCVRSGGGYIKKISRSHDSVCY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01206 462 PANTHER - 60 429 - -
Accr9g01206 462 Gene3D - 47 448 IPR012334 -
Accr9g01206 462 MobiDBLite consensus disorder prediction 35 58 - -
Accr9g01206 462 SUPERFAMILY Pectin lyase-like 55 438 IPR011050 -
Accr9g01206 462 SMART pbh1 274 294 IPR006626 -
Accr9g01206 462 SMART pbh1 333 354 IPR006626 -
Accr9g01206 462 SMART pbh1 304 325 IPR006626 -
Accr9g01206 462 SMART pbh1 224 250 IPR006626 -
Accr9g01206 462 SMART pbh1 251 272 IPR006626 -
Accr9g01206 462 Pfam Glycosyl hydrolases family 28 96 414 IPR000743 GO:0004650|GO:0005975
Accr9g01206 462 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01206 Accr-Chr9 15422536 15428247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01206 1 461 Glycoside Hydrolase AT3G26610 60.169 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01206 K01213 - gmx:100803027 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01206 9 15422536 15428247 Accr9g01206 9 15422536 15428247 ECH