Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01047 ATGGAGATCCATCCTCCTGAAATCCTACAATCTAGGTTTTCTGATCCTGTTCTTGGCGGAGTACCCTTGGGCGGCGCTTCAACGATTACAGAAATTCCGGTTTCGGAGGGAGCTCGAATTGGGTCTTCATCGTCTTCGCATTCTGGGAGTCTTGATGACCTTTCTTTGGTTCCTTATGTACCAAATCAGATGGGAGTTTCAGCGTCTTTATCCAGTGAAGCCGAAGAGGAGCGGATCAGTGCGTCTTTACCATCCAATATAGGTGTGTCTCATCCTTATTTAGGTTCCAAAACCCTAGACGAGTGTTCACCTTCTGCATCAATAGAAATCTCGGCGCCTTTGGTGCCTCAGTCATCAACTCTCGAAGAGTCGTCACTGCCCATGGCAACGGCTGCCGAGAATAATTATTACCTCCCATTCTGTGATTCCGGTAGGGAAGATCGAGATGATGTTCCGGAGCCAATTCGATCGGTAAACAATTTATCATATTATCCGGCTGTATCATCTCCCAAGCATTGGGCTTCGTGGCCCTCTGCTTTACAGCTTCCCCCTAAAGAATCTTGGAATCCCGAGCTTACTACCAATCAAATATTGGTTCCATCTGAAGATACTGGCTCGCCTTTGAACAATGGGTTTAATGTTTCTGGAATTGTACCCTTCACGGTGGGTGCTGGGCTTGAAAATCTTGGAAACACATGCTTTTTCAATGTTATCTTGCAATGCCTTACACATACTGTGCCACTAATTCGGGGTCTTTATACTTGCAGTCATACTGCACCTTGTGGAAGTAGTATTGGTGGATTCTGTGTTCTTTGTGTTCTTCGTGATCACATTGAACTTTCTTTGAAGTCTGCTGGAAGAATTCTCCAACCTATGAAACTTGTTAACAATTTGAATTATTTTTCTTCTTTTTTTACAAGATACCAGCAGGAAGATGCCCATGAATTCCTGCAGTGCTTCTTAGATAAACTGGAAAGATGCTTTCTAGATTTAAAGAGAAATAGCGAGAATTGTGAACAAGCTGACAATCTAGTGGAAAAAATATTTGGAGGTCGCCTCATCAGCAAACTTCAATGTTGTAATTGTGGCCACTGTTCAGACACATATGAGCCTCTTATTGACTTTAGCTTGGAGATAGATAATGTGGACAGCCTTCCAAGTGCTTTAGCATCATTCACTAAGGTAGAACAGATAGATGCTAAGATTACATGTGATAGCTGCAAGGAAGAAGTATCCATGGAGAAGAGGCTTATTTTGGATCAGACACCTTCAGTTGCAGCATTTCATTTAAAGAGATTTAAGACAGATGGGATATATGTTGAAAAGATTGATAATCATGTGGATTTCCCTCTAGAACTGGACTTACAGCCTTATACCAATTGTAATGAAGCACTGAAGTATGACCTGTATGCCATTGTTGTACATGTTGGGTTTTCATCTACTTCTGGGCATTACTTTTGCTTTGTCCGCACTGCACCTGACATGTGGTATAGGTTGGATGACGATAAGGTTACTAGAGTTTGTAGAGATTTTGTGCTGTCTCAGGAAGCATACATATTACTCTATGCTCGACAGGGCACACCATGGCTATCTTCTATAATGGATGCTTCAAGTCCATTCTTGGCCCCGAGTGTCCTTAATACTTCTCCGAAGTCAGTTTTAGACAATGTTGATGGCTTGTATCGCCCTAATCCTAGTGAGGCAGTTTTGGCAAGTGGTGGTGCAAATGAATGCCAAGGAGTTTCTCAGCAGATGCCTGTTTGTTTTAGTGGAGGATTTAATAAAATGCTCAACAATTATATGAATTCAGGTTTTGAAGACGATCAAGTTCACTTCGAGCGAAATCCAACTATTGTTAGTACCAACAGCACTAAAGAAGAAACCACCCATGTCCAAGTGCCATGCAATGAGAGAAATGGTTCCCTGTCCTCACTTGATGAAAAGGTTCATCAGGAGACTGTTGATATTAGAGAGAATGATGTTTTCCACCCCTTAACTCCACCAAGCTCCCCAGGTCCAGAGTCTAATTCTCCAGATGTTGCTTGCAACATTCCTCGGGATCATTTGAAGATGGAGAATCGTGAGAGGTGTCAGAAACCACTAAAGACAGTTGATGATTCTGAGAGGAAAGAAGCTGTGAGATATCTTAGCAAGAATGTGCATAGTTCGAGGAGATCAAAACTGCTGGGTGCAATGTCTGCTGGGCCCTCCCCTGAAAGTTATTCTATCAGAAAGAGGAAGAAATTGGGTTCTCAATGTAAGAAATCCATACCACCTGGTGACCGTAAGAAATCAAATCATGGCTCTGTCATGTGTGCTTCAAGGTAA 2328 0.4244 MEIHPPEILQSRFSDPVLGGVPLGGASTITEIPVSEGARIGSSSSSHSGSLDDLSLVPYVPNQMGVSASLSSEAEEERISASLPSNIGVSHPYLGSKTLDECSPSASIEISAPLVPQSSTLEESSLPMATAAENNYYLPFCDSGREDRDDVPEPIRSVNNLSYYPAVSSPKHWASWPSALQLPPKESWNPELTTNQILVPSEDTGSPLNNGFNVSGIVPFTVGAGLENLGNTCFFNVILQCLTHTVPLIRGLYTCSHTAPCGSSIGGFCVLCVLRDHIELSLKSAGRILQPMKLVNNLNYFSSFFTRYQQEDAHEFLQCFLDKLERCFLDLKRNSENCEQADNLVEKIFGGRLISKLQCCNCGHCSDTYEPLIDFSLEIDNVDSLPSALASFTKVEQIDAKITCDSCKEEVSMEKRLILDQTPSVAAFHLKRFKTDGIYVEKIDNHVDFPLELDLQPYTNCNEALKYDLYAIVVHVGFSSTSGHYFCFVRTAPDMWYRLDDDKVTRVCRDFVLSQEAYILLYARQGTPWLSSIMDASSPFLAPSVLNTSPKSVLDNVDGLYRPNPSEAVLASGGANECQGVSQQMPVCFSGGFNKMLNNYMNSGFEDDQVHFERNPTIVSTNSTKEETTHVQVPCNERNGSLSSLDEKVHQETVDIRENDVFHPLTPPSSPGPESNSPDVACNIPRDHLKMENRERCQKPLKTVDDSERKEAVRYLSKNVHSSRRSKLLGAMSAGPSPESYSIRKRKKLGSQCKKSIPPGDRKKSNHGSVMCASR 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01047 775 Gene3D Cysteine proteinases 222 529 - -
Accr9g01047 775 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 134 525 - -
Accr9g01047 775 Pfam Ubiquitin carboxyl-terminal hydrolase 225 522 IPR001394 GO:0004843|GO:0016579
Accr9g01047 775 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 224 525 IPR028889 -
Accr9g01047 775 SUPERFAMILY Cysteine proteinases 223 524 IPR038765 -
Accr9g01047 775 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 467 485 IPR018200 GO:0004843|GO:0006511
Accr9g01047 775 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 225 240 IPR018200 GO:0004843|GO:0006511
Accr9g01047 775 MobiDBLite consensus disorder prediction 718 775 - -
Accr9g01047 775 FunFam Ubiquitin carboxyl-terminal hydrolase 20 220 528 - -
Accr9g01047 775 MobiDBLite consensus disorder prediction 657 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01047 Accr-Chr9 12453266 12456816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01047 225 524 Miscellaneous Gene Families AT4G31670 36.218 9.78e-49 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01047 K11855 - qsa:O6P43_033321 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01047 9 12453266 12456816 Accr9g01047 9 12453266 12456816 ECH