Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00976 ATGGAGGACACTCTCAAGTACCTCATGGGCTCGCCGGGCCCGTCGGGGTTTGGCTCTGGCTCCACCGCCGAACAAGTCACCGAAACCACCACCTCCTCCTCCTCCCATTTGTCCTCTCTCACCGCTATCATCACGGGCGCGACGTCGGGGATCGGAGCTGAAACGGCGAGGGTTCTAGCGAAGCGAGGAGTGAGGTTGATTCTGCCGGCGAGAACCCTGAAAGCCGCCGAAGAAACTAAAGCTCGCATCCTCTCTGAGTCTCCGAACTCACACATCATTGTGATGCCTCTCGATCTTAGTTCTCTTAGCTCTGTTCGCTCCTTTGTCTTTCATTTCCATTCCCATCATTTACCTCTCCACCTTCTCATAAACAACGCCGGAAAGTTCGCCCACCATCACGCAATCTCTGAAGATGGATTTGAAATGTCCTTCGCCACTAATTATCTAGGTCATTTTCTGTTGACGGACTTGTTGTTGAAGACGATGGTTGAAACGGCGGAGAAGTCGGGGATCCAAGGACGGATCGTGAACGTGTCTTCCAACGTACATGGCTGGTTTTCCGGCGACATTATCCGGTATCTAGCTCTTATTACACGTCATAACAGCCATTACGACCCCACACGTGCTTATGCTCTGTCCAAGCTCGCCAACATCTTACACACCAAGCATCTTGCTCTCAAACTCCAGGAAATGGGAGCGAACGTGACTGCGAATTGCGTTCATCCGGGGATTGTGAGAACCAGGCTCACCAGGGAACGTGAAGGCTTACTGACAGATATAGGGTTCTTGCTGACTTCCAAGTTCTTGAAAACCATTCCCCAGGCAGCAGCAACGACATGTTACGTGGCGACGCATCCGAGGCTGCTAAATGTGTCCGGCAAGTACTTTGCTGACTGCAACGAAGCTTCCACGTCAAAACTCGCATCCAATTCATCGGAAGCTGCTAGGTTGTGGACAGCTTCTGAGTGCATGATCTCTGACGGCCCCAAATCTCTTGTTGATCTCCTCCACAATCAATGA 1020 0.5167 MEDTLKYLMGSPGPSGFGSGSTAEQVTETTTSSSSHLSSLTAIITGATSGIGAETARVLAKRGVRLILPARTLKAAEETKARILSESPNSHIIVMPLDLSSLSSVRSFVFHFHSHHLPLHLLINNAGKFAHHHAISEDGFEMSFATNYLGHFLLTDLLLKTMVETAEKSGIQGRIVNVSSNVHGWFSGDIIRYLALITRHNSHYDPTRAYALSKLANILHTKHLALKLQEMGANVTANCVHPGIVRTRLTREREGLLTDIGFLLTSKFLKTIPQAAATTCYVATHPRLLNVSGKYFADCNEASTSKLASNSSEAARLWTASECMISDGPKSLVDLLHNQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00976 339 PANTHER RETINOL DEHYDROGENASE 14 324 - -
Accr9g00976 339 MobiDBLite consensus disorder prediction 1 33 - -
Accr9g00976 339 Pfam short chain dehydrogenase 41 182 IPR002347 -
Accr9g00976 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 302 IPR036291 -
Accr9g00976 339 Gene3D - 25 327 - -
Accr9g00976 339 PRINTS Glucose/ribitol dehydrogenase family signature 233 250 IPR002347 -
Accr9g00976 339 PRINTS Glucose/ribitol dehydrogenase family signature 167 183 IPR002347 -
Accr9g00976 339 PRINTS Glucose/ribitol dehydrogenase family signature 210 229 IPR002347 -
Accr9g00976 339 PRINTS Glucose/ribitol dehydrogenase family signature 41 58 IPR002347 -
Accr9g00976 339 PRINTS Glucose/ribitol dehydrogenase family signature 117 128 IPR002347 -
Accr9g00976 339 MobiDBLite consensus disorder prediction 15 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00976 Accr-Chr9 11409692 11411524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00976 17 296 Acyl Lipid Metabolism Gene Families AT1G24360 25.676 3.30e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00976 - - gmx:100794347 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00976 9 11409692 11411524 Accr9g00976 9 11409692 11411524 ECH