Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00969 ATGGCGATTGCTTCTCACCCGACTCCGAGCTTCTCACCTTCTTTCTGCTCCACTCGGACCCAATTCTCTCGCCTCTCGTGCTTCCCCTCCGTCACCCTGTCTCAGTCTCGCTCAAACCAAACTCGTCGACTTATATCGTCTCGGCTCAATTCGTCTAAATTTTCCGATGCTGATGGCTCTGTCTCGCCGGGCAAAGGGGATTTCCCCTACGAACTCCAACACGATTTTTCACCTCAACGTCAGAGGAGGGGATCGCCGGTATACGTCACGCTTCCATTAGATTCCGTGGACGAGGAGGGGCGAGCCTTGAGGCTGAAAATTTTGATGGCCTCTTTCAGGGCGCTCGCATTGGCTGGAGTAGAAGGCGTGGTTTTGGAGATTTGGTGGGGTTTAGTTGAGAGGAATGAGCCTATGGTTTATAATTGGCGAGGTTATTGCCAACTCGTCAAGTTGGCTGGAACCTTCGGCCTGAAGGTTCGAGTTGTCCTTGCGTTTCATCAGTGTGGCACGGACCCTGGTGATCCTCATTGGATACCTCTTCCTCTATGGGTGCTTGATGAGATAAAAAAAGATCCAGATTTAGTATATTCAGATAGGTTTGGGACAAAAAGTGCTGAATACATCTCACTTGGATGTGATGCACTTCCTGTGCTCTGTGGACGATCCCCGATTCAGGCATATGCTGATTTTATGAGGAACTTCAGGGACACCTTCAGGCCTTACTTTGGCATTATCATAACAGGAATACAGATTGGCATGGGTCCTGGTGGTGAATTAAGATATCCTTTATGCCCTTCCCAATTAACCCATGACAGGCACTCTGAATTTGGAGAATTTCAGTGCTATGATAAGTATATGATTGCATCATTAAATGCTTGTGCAAGAGATATTGGAATGCCTGCATGGGGACAAGGAGCTCCACGTGACACTGGAAGTTCAAGGCACAATCTGTTTTCTACTAGTGAGAATGGCAAAGACCCTTGGAACTCACCACAGGGTGAGTATCGCCCTTGGAACTTGCCAGAGGGTAGGTTTTTCCTCGAGTGGTACTCAGGGATGTTGCTTCTGCATGGACAAAGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGTACAGAAGTCAACATATCAGCAAAAGTGGCTGCTATTCACTGGCACTACCTGACTGATTCTCACGCATCAGAGTTAACCGCAGGGTATTACAATACTTCTGAGAGGGATGGATACTTACCCATTGCTCGCATGTTTAGTAAGTATGGATTTGGCATATGCTGCTCAGGTTTTGAAATGCAAGATGCAGTAGTAAATAAGATAAACCCAGCCGGCAGCCCAGAAGGTTTTCTTAAACAGCTGCTCTTGGCTGCTAGGCTCTGTGACATGCAACTTGAAGGTCAAAATTTTTCATCCAATTTAAATGATATATCATTCGAGCAGGTGCTGAAGATGTCAAAGTTTTATACAGAAGGGGTTGAAAAGCGCCCCTTCTCTTTCAACTTTGTGAGGATGGGCAGGAAAATGTTTGGATCTCGTTTTTGGGACCGTTTTACTCGTTTTGTGAGGCAATTGTCAGATGGAAGTAATTTTCAAGCCAGACTAAATTCTGTTTGTGACGCACGTCACAAATGCTTGACCATGGCTAGGGCTGCAGAACCTGGAGTGCTCTACCAGCACTGCTAA 1677 0.4639 MAIASHPTPSFSPSFCSTRTQFSRLSCFPSVTLSQSRSNQTRRLISSRLNSSKFSDADGSVSPGKGDFPYELQHDFSPQRQRRGSPVYVTLPLDSVDEEGRALRLKILMASFRALALAGVEGVVLEIWWGLVERNEPMVYNWRGYCQLVKLAGTFGLKVRVVLAFHQCGTDPGDPHWIPLPLWVLDEIKKDPDLVYSDRFGTKSAEYISLGCDALPVLCGRSPIQAYADFMRNFRDTFRPYFGIIITGIQIGMGPGGELRYPLCPSQLTHDRHSEFGEFQCYDKYMIASLNACARDIGMPAWGQGAPRDTGSSRHNLFSTSENGKDPWNSPQGEYRPWNLPEGRFFLEWYSGMLLLHGQRICREAETIFRGTEVNISAKVAAIHWHYLTDSHASELTAGYYNTSERDGYLPIARMFSKYGFGICCSGFEMQDAVVNKINPAGSPEGFLKQLLLAARLCDMQLEGQNFSSNLNDISFEQVLKMSKFYTEGVEKRPFSFNFVRMGRKMFGSRFWDRFTRFVRQLSDGSNFQARLNSVCDARHKCLTMARAAEPGVLYQHC 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00969 558 Pfam Glycosyl hydrolase family 14 88 518 IPR001554 GO:0000272|GO:0016161
Accr9g00969 558 SUPERFAMILY (Trans)glycosidases 84 530 IPR017853 -
Accr9g00969 558 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 34 529 IPR001554 GO:0000272|GO:0016161
Accr9g00969 558 Gene3D Glycosidases 76 552 - -
Accr9g00969 558 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 391 402 IPR001554 GO:0000272|GO:0016161
Accr9g00969 558 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 162 183 IPR001554 GO:0000272|GO:0016161
Accr9g00969 558 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 338 357 IPR001554 GO:0000272|GO:0016161
Accr9g00969 558 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 119 133 IPR001554 GO:0000272|GO:0016161
Accr9g00969 558 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 140 158 IPR001554 GO:0000272|GO:0016161
Accr9g00969 558 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 409 432 IPR001554 GO:0000272|GO:0016161
Accr9g00969 558 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 374 390 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00969 Accr-Chr9 11335092 11338029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00969 86 527 Glycoside Hydrolase AT4G17090 45.824 4.23e-136 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00969 K01177 - gmx:100805981 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00969 9 11335092 11338029 Accr9g00969 9 11335092 11338029 ECH