Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00951 ATGGGATGCACTTGCTCCAAAGAACGTCTTGTGCATGAAGATCCAGCAGTTCTTGCTGCCCAAACCTGCTTCAACGTATCTGAAATTCAAGGACTTTATGAGTTGTTCAAGGAGCTGAGTAGTTCGGCTGTTGATGACGGGCTTATCAGCAAAGAAAAGTTTCAGTTATGCTTATTGGGAAGTAGCAAGATACAGAGTCTATTTGCTGACCGGGTTTTTCATTTATTTGACTCAAAAAATAATGGGGTAATAGAGTTTGGTGAGTTTGTTCGAGCTCTAAGTGTCTTCCATCCAGTTGCACCACAGGAACAAAAAGCAGCTTTTGCATTTCAAATTTATGATCTATGGCAAACAGGCTTCATTGAACGTGACGAGGTAAGAGAGCTGATATTGGCGCTTTTAAGAGAGTCAGATTTGATTCTTTCTGCAGACTTAATTGAGGCCATAATTGATCAGGCATTTAAGGAGGCAGATTTAAAAGGAGACGGAAAGATCGATCTTGAGGAATGGAATGAATTTGCAGCTCAAAACCCATCCATACTGAAGAATATGACAATTCCATATTTAAAGTAA 573 0.3979 MGCTCSKERLVHEDPAVLAAQTCFNVSEIQGLYELFKELSSSAVDDGLISKEKFQLCLLGSSKIQSLFADRVFHLFDSKNNGVIEFGEFVRALSVFHPVAPQEQKAAFAFQIYDLWQTGFIERDEVRELILALLRESDLILSADLIEAIIDQAFKEADLKGDGKIDLEEWNEFAAQNPSILKNMTIPYLK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00951 190 Gene3D - 14 190 - -
Accr9g00951 190 Pfam EF-hand domain pair 104 169 IPR002048 GO:0005509
Accr9g00951 190 CDD EFh 105 175 IPR002048 GO:0005509
Accr9g00951 190 ProSiteProfiles EF-hand calcium-binding domain profile. 145 180 IPR002048 GO:0005509
Accr9g00951 190 SUPERFAMILY EF-hand 16 188 IPR011992 -
Accr9g00951 190 ProSiteProfiles EF-hand calcium-binding domain profile. 64 99 IPR002048 GO:0005509
Accr9g00951 190 PANTHER CALCINEURIN B 1 190 IPR045198 GO:0005509|GO:0019722|GO:0019900
Accr9g00951 190 ProSiteProfiles EF-hand calcium-binding domain profile. 101 136 IPR002048 GO:0005509
Accr9g00951 190 PRINTS Recoverin family signature 165 185 - -
Accr9g00951 190 PRINTS Recoverin family signature 72 93 - -
Accr9g00951 190 PRINTS Recoverin family signature 119 137 - -
Accr9g00951 190 SMART efh_1 105 133 IPR002048 GO:0005509
Accr9g00951 190 SMART efh_1 68 96 IPR002048 GO:0005509
Accr9g00951 190 SMART efh_1 149 177 IPR002048 GO:0005509
Accr9g00951 190 FunFam calcineurin B-like protein 3 14 190 - -
Accr9g00951 190 Pfam EF-hand domain pair 46 92 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00951 Accr-Chr9 11111839 11113137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00951 22 190 EF-hand Containing Proteins AT5G24270 60.947 4.34e-77 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00951 K06268 - zju:107429803 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00951 9 11111839 11113137 Accr9g00951 9 11111839 11113137 ECH