Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00929 ATGAGCTCTCAAGTCTGCAGATCCGCTTCTAGAGCTGTGAGATCTTTTCTCTCTGCTTCCAAGGGCTCTCGCTTTTACTCTGAAGGGAGCACTGTAGCCGCCGCCGCCACCGTTTCACTCACAAGGAAAGTCCCTCTTTTTGCTTCAAACATCGGGAAGTCTGAATCCGGAAATGGATCCAGAGCATGGCTTTCAGGGGTTCTCGCTCTTCCTGCTGCAGCTTACTTGCTCCAAGATCAAGAGGCACATGCTGCTGAGCTGGAGCGCACTTTCATTGCCATTAAGCCCGATGGAGTCCAAAGAGGGCTGATTTCAGAGATCATATCTCGTTTTGAGAGGAAAGGGTTCAAACTCGTGGGAATTAAAATATTGGTTCCTTCAAAAGATTTTGCACAGAAGCATTATCATGACCTGAAGGAAAGACCCTTCTTCAATGGCCTTTGTGAATTCCTAAGCTCTGCTCCTGTTATTGCCATGGTCTGGGAAGGGCAGGGAGTTATTACCTATGGCCGAAAACTAATCGGGGCCACTGATCCACAGAAATCTGAGCCTGGCACTATCAGAGGTGATTTGGCCGTCGTGGTTGGAAGAAATATCATCCACGGGAGTGATGGACCAGAGACTGCCAAGGACGAAATTAATTTGTGGTTCAAGCCAGAGGAGTTGGTAAATTACACAAGCAATGCAGAAAAGTGGATTTATGGTGCTGTCCTGTCAATCCATGCCTCGTTCTTTTCTAGTTACTTTCATTTTCGAGATGAAATAAGGATCACCCACCATGCATTTATCCTATAA 795 0.4667 MSSQVCRSASRAVRSFLSASKGSRFYSEGSTVAAAATVSLTRKVPLFASNIGKSESGNGSRAWLSGVLALPAAAYLLQDQEAHAAELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKILVPSKDFAQKHYHDLKERPFFNGLCEFLSSAPVIAMVWEGQGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVNYTSNAEKWIYGAVLSIHASFFSSYFHFRDEIRITHHAFIL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00929 264 ProSitePatterns Nucleoside diphosphate kinases active site. 198 206 IPR023005 -
Accr9g00929 264 FunFam Nucleoside diphosphate kinase 83 235 - -
Accr9g00929 264 Gene3D - 83 239 IPR036850 -
Accr9g00929 264 CDD NDPk_I 88 217 - -
Accr9g00929 264 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 79 235 - -
Accr9g00929 264 PRINTS Nucleoside diphosphate kinase signature 90 112 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Accr9g00929 264 PRINTS Nucleoside diphosphate kinase signature 154 171 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Accr9g00929 264 PRINTS Nucleoside diphosphate kinase signature 175 191 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Accr9g00929 264 PRINTS Nucleoside diphosphate kinase signature 198 217 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Accr9g00929 264 PRINTS Nucleoside diphosphate kinase signature 134 153 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Accr9g00929 264 Hamap Nucleoside diphosphate kinase [ndk]. 87 222 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Accr9g00929 264 SMART ndk_5 87 224 IPR034907 -
Accr9g00929 264 SUPERFAMILY Nucleoside diphosphate kinase, NDK 87 234 IPR036850 -
Accr9g00929 264 Pfam Nucleoside diphosphate kinase 88 221 IPR034907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00929 Accr-Chr9 10872134 10874790 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00929 K00940 - pcin:129284597 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00929 9 10872134 10874790 Accr9g00929 9 10872134 10874790 ECH