Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00229 ATGAAGTGCCCGTACTGCACGGCGGCTCAAGGGCGTAGCACCACCACCAGCTCCGCCCGCTCCATAACGGAGTGCACATCCTGCGGCCGAGTTGTTGAAGAGCGACAGACCCACCCTCATCATATCTTCCACCTCCGCGCACAAGACAATCCTCTTTGTCTCGTCACTCCCGACATACCCTCCCTCCAAACCTTTCATCAAAGCCAAGTCGACGATGACCCCTTCGAGCCCACCGGCTTCATCACTGCATTTTCCACTTGGTCCCTTGAGCCCAGCCCTCTCTACCTCCAGTCCTGTCTTTCCTTCTCTGGCCACCTCGCCGAGCTTGAGAGGGCCCTCGAATCGTCCTCATCTTCATCCTCCTCTTCGACACCATCATCTTCGACTTCGTCGACGGTTGTGGTTGATAATTTGAGGGCGTACATGCAGATTATTGATGTCGCTTCGATACTTGGGTTGGACTACGATATCTCCGATCATGCGTTTCAATTATTCAGGGATTGTTGCTCGGCTACTTGTTTGAGAAACCGGAGCGTCGAAGCGCTTGCCACTGCTGCTCTTGTTCAGGCAATTAGAGAGGCTCAGGAACCCAGAACCCTTCAGGAAATTTCAATTGCAGCGAATGTGCCGCAAAAGGAAATTGGGAAATACATCAAGATACTTGGGGAGGCTTTGCAGCTCAGTCAGCCTATTAACAGCAACTCTATTTCAGTCCATATGCCTAGATTTTGTACCCTTCTACAACTCAATAAATCTGCTCAGGAACTGGCCACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCTATTAGCATTTCAGCAGCTGCTATATACCTGGCTTGCCAACTTGAAGACAAACGCAAAACACAGGCAGAAATCTGCAAGGTGACTGGTCTTACTGAAGTCACTCTTCGGAAAGTGTACAAGGAACTTCTAGAGAATTGGGATGATTTGCTTCCCTCCAATTATACACCAGCTGTTCCTCCTGAGAGGGCATTCCCTACTACTGTAATTGCTTCAGGTCGTTCATCAGCAACTAAGGTCGATGCAATAGAGATGAATTCCTCTTTAGACAGAGACAAGCTAATAGAAATTAAACCTAGCAAACCAAATGAGGTTCCAGTCATGGTACATCAGCTGAGGGGGAAAGATGATGTTGAAAGCAAGAGCAATGCTTGCGCGACCCACTCGACACTGAATCAGCAGTCATCTTTCTGGCAATCCCAGCTTCCTACTGGGGTGTGTAATCATAGAACGACAGGAGAAAAAAGTTGGAATGTTTTACAAGGAATGGATGTAGAGGGACTACAGCATAACCACCTACAGCCTGAACAGAAGTCTGAAGATACAAATGGTATTAATATTAATCCTTTTCAAAAACCCAACCATCTTAGCAGTCCTTCTGCGTCGTCTGCTAGCCCTGTTATGAAGCCCTTTTCGGCTCCGCCTTCGTCTACGCCTCCAAATGTGTGA 1491 0.4816 MKCPYCTAAQGRSTTTSSARSITECTSCGRVVEERQTHPHHIFHLRAQDNPLCLVTPDIPSLQTFHQSQVDDDPFEPTGFITAFSTWSLEPSPLYLQSCLSFSGHLAELERALESSSSSSSSSTPSSSTSSTVVVDNLRAYMQIIDVASILGLDYDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSATKVDAIEMNSSLDRDKLIEIKPSKPNEVPVMVHQLRGKDDVESKSNACATHSTLNQQSSFWQSQLPTGVCNHRTTGEKSWNVLQGMDVEGLQHNHLQPEQKSEDTNGININPFQKPNHLSSPSASSASPVMKPFSAPPSSTPPNV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00229 496 CDD CYCLIN_TFIIB_archaea_like_rpt2 235 321 - -
Accr9g00229 496 Gene3D - 138 229 - -
Accr9g00229 496 FunFam Transcription initiation factor IIB 238 335 - -
Accr9g00229 496 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 359 IPR000812 GO:0006352|GO:0070897
Accr9g00229 496 SUPERFAMILY Cyclin-like 236 334 IPR036915 -
Accr9g00229 496 PRINTS Transcription initiation factor IIB signature 273 289 IPR000812 GO:0006352|GO:0070897
Accr9g00229 496 PRINTS Transcription initiation factor IIB signature 305 319 IPR000812 GO:0006352|GO:0070897
Accr9g00229 496 PRINTS Transcription initiation factor IIB signature 239 257 IPR000812 GO:0006352|GO:0070897
Accr9g00229 496 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Accr9g00229 496 PRINTS Transcription initiation factor IIB signature 184 203 IPR000812 GO:0006352|GO:0070897
Accr9g00229 496 PRINTS Transcription initiation factor IIB signature 210 225 IPR000812 GO:0006352|GO:0070897
Accr9g00229 496 Pfam Transcription factor TFIIB repeat 140 221 IPR013150 GO:0017025
Accr9g00229 496 Pfam Transcription factor TFIIB repeat 238 319 IPR013150 GO:0017025
Accr9g00229 496 MobiDBLite consensus disorder prediction 452 485 - -
Accr9g00229 496 FunFam Transcription initiation factor TFIIB 138 229 - -
Accr9g00229 496 SUPERFAMILY Cyclin-like 139 229 IPR036915 -
Accr9g00229 496 Gene3D - 238 334 - -
Accr9g00229 496 MobiDBLite consensus disorder prediction 447 496 - -
Accr9g00229 496 SMART cyclin_7 238 319 IPR013763 -
Accr9g00229 496 SMART cyclin_7 142 223 IPR013763 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00229 K03124 - gmx:102662353 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00229 9 2535974 2540032 Accr9g00229 9 2535974 2540032 ECH