Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00216 ATGGTTCACAGTGCCTACGATTCATTCCAACTCCTCGACAATTGTCCTTCGAAGATCGAAGCTGTCGAATCTTATGGCTTTAAGCTCCTCCTGGGCTGCTCTGATGGCTCCCTCCGAATATACGCTCCAGAATCATCCGATTCCGATCGGTCTCAGTCGGCCGATCAACAAGCTCAGGAGCTGCGGCAGGAAGCCTACGTGCTCGAAAAAAACTTGACTGGCTTTGCGAAGAAGCCTATCTTATCAATGGAGGTCTTGGAATCCAGGGAATTGCTACTTTCACTTTCCGAATCTATTGCTTTTCATCGTCTTCCGAATTTTGAAACCATAGCAGTCATCACCAAGGCCAAGGGCGCCAATGTGTTCTCCTGGGATGAACGAAGAGGTTTCTTATGCTTTGCCAGGCAAAAGAGGGTCTGTATTTTCAGACACGATGGTGGCAGAGGATTTGTGGAGGTGAAAGAATTTAGTGTTCCGGATGTGGTGAAGTCGATGTCTTGGTGCGGTGAAAATATATGTCTGGGGATTAGAAGAGAATATGTAATACTGAATGCTACAAATGGTGCATTGTCTGAGGTATTTACCTCTGGGAGACTAGCGCCGCCTTTAGTGGTCTCTCTACCTTCAGGGGAACTTCTTCTTGGAAAGGAGAACATTGGGGTCTTTGTGGACCAAAATGGGAAACTTCTTCCAGAAGGCAGGATTTGTTGGTCGGAGGCTCCTGCAGAAGTTGTAATCCAGAAGCCATATGGAATAGCCCTGCTGCCAAGATTTGTAGAGGTTCGATCCCTTCGAGATCCATTTCCACTTATACAGACTGTTGTTCTTCGAAACGTTCGTCATCTTCGCCAAAGCAACAATTCTGTGGTTCTTGCATTAGATAATTCTGTTCACGGACTCTTCCCTGTTCCTCTTGGAGCCCAGATTGTCCAATTAACAGCATCTGGCGACTTTGAAGAAGCTCTGTCATTGTGCAAACTCCTTCCACCTGAAGATTCAAATCTCCGTGCTGCAAAGGAGGGTTCAATCCATATAAGATATGCTCACTATCTTTTTGAAAATGGGAGCTATGAGGAGGCAATGGATCATTTTCTTGCATCTCAAGTAGATATAACTTATGTTCTTTCTCTGTATCCATCCATTATCCTTCCCAAGACAACCGTTGTTACTGAGCCAGAGAACTTGGGTGACATTTCCTTGGATGCATCATATCTCTCTAGAGATTCTTCAGGTCTGTCAGATGATATGGAAACCCCACCACCACCTTTGTCAGAATATGATGCAGCACTTGAATCCAAAAAGATTAGTCATAATATGCTTATGGCTCTCATAAAGTTTTTGCAGAAAAAGAGATTTAGTGTTATTGAGAAGGCCACTGCTGAGGGGACAGAGGAGGTTGTTTTAGATGCAGTTGGGGACAACCTGGTATCCTATAACAGTAGTAGGTTTAAGAAAACAAACAAGGGGCGTGGTAGTGTTCCTGTTAGTTCAGGAGCTAGGGAGATGGCTTCAATATTGGATACTGCACTTCTCCAAGCATTGCTTCTTACTGGACAATCTTCTTCTGCTCTAGAACTACTGAGAGTTCCAAACTACTGTGATTTGAAGATATGTGAAGAGATACTTCGTAAAGGCAGCAATAATGTTGCTTTATTGGAACTTTACAAGTGCAATTCAATGCACCGAGAAGCTCTTGAGCTCCTTCATCAGTTAGTGGAGGAGTCAAAGTCAAACCCGTCTGAAGTTACACATAAGTTCAAGCCTGAGGCAATTATTGAGTATCTCAAGCCTCTGTGTAATTCAGACCCCATGCTTGTTCTGGAGTACTCAATGCTTGTTCTTGAAAGCTGTCCGACACAAACTATTGAGCTCTTTCTCTCTGGAAATATTCCTGCTGATATGGTGAACTCCTATTTGAAGCAACATTCTCCAAATATGCAGACTACTTACTTGGAACTCATGCTTGCAATGAATGAGAGTGCCATCTCTGGAAACTTGCAAAATGAAATGGTACAAATCTATCTTTCTGAAGTACTTGAGTGGCATGCTGATTTAAGTGCTAGACAGAAATGGGATGAGAAAGCTCTCTCCCCGACAAGGAAGAAATTATTGTCTGCTTTAGAGAGTATATCAGGATACAATCCAGAAGCTCTATTGAAATGTCTTCCATCTGATGCTTTATATGAGGAGCGTGCTATACTGTTGGGTAAAATGAACCAGCATGAATTGGCACTGTCTTTATATGTTCATAAGCTTCATGTTCCGGAATCAGCCTTGTCCTATTGTGATCGGGTTTATGAATCTACAAATCATCCACCAGGAAAATCTCCCAGCAACATATACCTATCTCTTCTGCAAATCTATTTAAATCCACGAAGGACAACCAACAGTTTTGAAAAGAGAATCATGAATCTATTATCTACCCAGAATACAAGCATTCCTAAGGTTAGCCATATGACATCAATAAGATCTAAAGTAGGCCGGGGAAGTAAAAAGATTGCAGCAATAGAAGGTGCAGAGGACACAAAAGTTAGTTTGAGCAGCACTGATAGTAGTCGGAGTGATGGTGATCTGGATGAATTAAGTGAGGAAAGTGGTAGTACAATCATGCTTGACGAAGTCCTTGATTTGTTGAGTCGCCGATGGGATAGAATAAATGGAGCTCAGGCCCTCAAACTTTTACCGAGAGAAACTAAACTCCAGAACTTGCGTCCATTTCTTGGACCTCTTGTGCGAAAATCTAGTGAAATGTACCGTAATTACTCAGTGATCAAGAGCTTGAGACAAAGCGAGAACCTTCAGGTGAAAGATGAACTCTACAATCAGAGGAAAGCAGCTGTGAAGATAACCGGTGACAGCATCTGTTCACTTTGCCATAAGAAGATAGGGACTAGTGTATTTGCGGTCTACCCTAATGGAAAAACTCTCGTGCACTTTGTCTGTTTCCGAGATTCTCAGAGCATGAAAGCTGTGGCCAAAGGTTCGTCATTGAGGAAGCGGATGTAG 3006 0.4288 MVHSAYDSFQLLDNCPSKIEAVESYGFKLLLGCSDGSLRIYAPESSDSDRSQSADQQAQELRQEAYVLEKNLTGFAKKPILSMEVLESRELLLSLSESIAFHRLPNFETIAVITKAKGANVFSWDERRGFLCFARQKRVCIFRHDGGRGFVEVKEFSVPDVVKSMSWCGENICLGIRREYVILNATNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPAEVVIQKPYGIALLPRFVEVRSLRDPFPLIQTVVLRNVRHLRQSNNSVVLALDNSVHGLFPVPLGAQIVQLTASGDFEEALSLCKLLPPEDSNLRAAKEGSIHIRYAHYLFENGSYEEAMDHFLASQVDITYVLSLYPSIILPKTTVVTEPENLGDISLDASYLSRDSSGLSDDMETPPPPLSEYDAALESKKISHNMLMALIKFLQKKRFSVIEKATAEGTEEVVLDAVGDNLVSYNSSRFKKTNKGRGSVPVSSGAREMASILDTALLQALLLTGQSSSALELLRVPNYCDLKICEEILRKGSNNVALLELYKCNSMHREALELLHQLVEESKSNPSEVTHKFKPEAIIEYLKPLCNSDPMLVLEYSMLVLESCPTQTIELFLSGNIPADMVNSYLKQHSPNMQTTYLELMLAMNESAISGNLQNEMVQIYLSEVLEWHADLSARQKWDEKALSPTRKKLLSALESISGYNPEALLKCLPSDALYEERAILLGKMNQHELALSLYVHKLHVPESALSYCDRVYESTNHPPGKSPSNIYLSLLQIYLNPRRTTNSFEKRIMNLLSTQNTSIPKVSHMTSIRSKVGRGSKKIAAIEGAEDTKVSLSSTDSSRSDGDLDELSEESGSTIMLDEVLDLLSRRWDRINGAQALKLLPRETKLQNLRPFLGPLVRKSSEMYRNYSVIKSLRQSENLQVKDELYNQRKAAVKITGDSICSLCHKKIGTSVFAVYPNGKTLVHFVCFRDSQSMKAVAKGSSLRKRM 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00216 1001 Pfam Vacuolar sorting protein 39 domain 1 506 614 IPR019452 -
Accr9g00216 1001 Pfam Region in Clathrin and VPS 634 764 IPR000547 GO:0006886|GO:0016192
Accr9g00216 1001 ProSiteProfiles Citron homology (CNH) domain profile. 16 289 IPR001180 -
Accr9g00216 1001 Coils Coil 51 71 - -
Accr9g00216 1001 Pfam Vacuolar sorting protein 39 domain 2 875 983 IPR019453 -
Accr9g00216 1001 Pfam CNH domain 28 282 IPR001180 -
Accr9g00216 1001 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 609 796 IPR000547 GO:0006886|GO:0016192
Accr9g00216 1001 MobiDBLite consensus disorder prediction 844 864 - -
Accr9g00216 1001 SUPERFAMILY WD40 repeat-like 27 179 IPR036322 GO:0005515
Accr9g00216 1001 PANTHER CNH DOMAIN CONTAINING 1 988 IPR032914 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00216 Accr-Chr9 2340274 2346848 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00216 K20183 - qsu:111998801 1598.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00216 9 2340274 2346848 Accr9g00216 9 2340274 2346848 ECH