Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00151 ATGACCAGCTCTTCCGCTGCCTCTCGCAAGGCTCTCAGTAAGATTGCCTGCAATAGGCTTCAGAAGGAACTTGTAGAGTGGCAGGTTAACCCCCCCGCCGGTTTCAAGCACAAAGTCACCGATAATCTCCAAAGGTGGGTTATTGAAGTGACTGGAGCTCCGGGTACACTTTACGCCAATGAAACCTACCAACTTCAGGTCGACTTTCCCGAGCACTACCCCATGGAAGCTCCACAGGTCATATTTTTGCACCCTGCTCCACTGCATCCCCATATCTATAGTAATGGGCACATTTGTTTAGATATACTGTATGACTCATGGTCTCCGGCCATGACAGTTAGTTCTATCTGCATCAGCATTCTTTCAATGCTTTCAAGCTCGACTATAAAGCAACGCCCTGAAGATAATGACCGCTATGTAAAGAACTGCAGAAATGGTAGATCTCCTAAGGAGACAAGGTGGTGGTTCCATGATGATAAAGTATAA 486 0.4671 MTSSSAASRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVTGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTIKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00151 161 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 15 161 IPR000608 -
Accr9g00151 161 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 15 137 - -
Accr9g00151 161 SUPERFAMILY UBC-like 6 126 IPR016135 -
Accr9g00151 161 Gene3D Ubiquitin Conjugating Enzyme 15 161 IPR016135 -
Accr9g00151 161 SMART ubc_7 18 161 - -
Accr9g00151 161 CDD UBCc 17 117 IPR000608 -
Accr9g00151 161 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 88 103 IPR023313 -
Accr9g00151 161 FunFam probable ubiquitin-conjugating enzyme E2 16 13 161 - -
Accr9g00151 161 Pfam Ubiquitin-conjugating enzyme 19 154 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00151 Accr-Chr9 1731292 1733454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00151 12 124 Miscellaneous Gene Families AT1G17280 28.814 8.67e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00151 K10688 - jre:108992052 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00151 9 1731292 1733454 Accr9g00151 9 1731292 1733454 ECH