Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00049 ATGGAAAATCATGAAGGAGATCCTTCTAAACCTGAGGAGCAGTTCTCAGACAGGAATCATCACAACCATGGAAGCTATGTAAATCTTGTTTTACAAAATGGCTTATCTGATGACAACAGCAGTCAAGTTGATCTTGATGATCAGCTTCTACAATTGGCTTTGGAACTTAGATTTCAGAATGATTTTTTGAAGTCTCAATTTGAGGGCTTTAACAGTCTAAACAGTGTACGTAGTGAATCTAGTAAGGGGAGAAAAGTTGGTGGCCCAGAAGAAGTTCAATCTGATATCATTGAAGAATTGCAGGAAAGGATACAAGCATTGAATAAAGAACTTCTAGATGAAAAAAAAACAAGAGGTGCAGCTGAAGAGGCTCTGAAGCATCTTCAATTGGCATACTCAGAGGCAGATGTGAAAGCTCAAGAGCTTTCTGAAAAGCTTGCTGCAGCTGAAAAGAAATTTGATCAAGAAATAAAAGAGCGTGAAGAAAAGTATACTGAACTTGACACAAAGTTTAACAGGCTTCACAAAAGAGCAAAGCAGCGCATTCAGGAGGTTCAGAAGGAAAAAGATGATATTGAGGTTCAATTGCGTGAGGTGAATGAAAAGGCTGAGCAAGCATCATCCCAGCAATTGTCTTTGCAGCAGGAGTTAGAGCGCACAAGGCAGCAAGCAAATGAGGCATTGAAGGCCATGGATGGGGACAGACAGCAGCTAAGAAGTGCAAATAACAAACTTCGGGATACCATTGAGGATTTGAGGCGTTCATTGCAACCAAAAGAGAGTGCCCTTGAAGCATTGCAACAGTCACTTGCAGAAAAGGAACAGATGATAGAAGATATGAGAGGGTTGCTTCAGGCAGCTGATGAAAAGAAGCAAGCTGCACTGACTGAGCTTTCAGCTAAACATCAGAAGAATATGGAGAGTTTGGAAGCTCAACTTAGCGATGCTATATCTGATAGAAATAAAGCGGCTGAAACTATTTCCTCAATGCAGGTGCTAGTTGCAGGGAAAGAATCTAAGATTGCTGAGGTTGAGGCAGCATCAACTGGGGAAGCTGCACGACTCAGAGCAGCTATTGAAAGTGTGAAGGGGGAGCTTTCTCACCTGAAACAGGAGCATGAGAAAGAAAAGGAAAATTGGTCGACTGCGGCTCAGGCACTTAAGGCAAAACTTGAAATTGCGGAGAGCAACTGCATACATGCTGAAATTGAAGTAGCAAAAATGAGAGGTCAGCTGGAATCAGAAGTATTTGCACAAACCAGGATTCTCAATACTAGAGATGCAGAATTGTTGTCTGCCAAGGAAGAGATTAGCCGCCTCGAGAATGAATTTTCTTCATACAAAGTTCGTGCTCACTCACTTCTTCAGAAGAAGGATGCAGAACTGGCAGCAGCCAAAGACTCTGAGCAACTCAAAGCTCTTGAGGAAGCTTTAAAAGAGGCTGAAAATGAAGTATTATCAATTGCAGAAGAAAGGGATAGAGCTCTTCAAGATCTTCAAGATGCAACAAAAATTCATGAGAAAGAACTCACAGAAAGAGACACAGCACTTGAAAATGTCAAGGGGCAAATAAGGAGTTTAGAGATGAAATTCGATTCTGTCAATGCTCAGCACCTAAAAGAGAAAGAAGCATGGGGACTCAGCCTTCAAAATGTTGAAGAAACATGGCGAATTAAATATGAGGCCATGAAGGCTGAAACTGAAGGATCTTCAGCACATGATATGCAACTACGAAAGGAACTTGAAGAGCTGAAACAAAAGTACAAAAAATTGAAGGAAGAGCATGATTCTTTTCGTGATCTTGCTGATAGAATGATTCAGGAGAAAGACAATGAAATATCTAGACTTTTAGATGATAACAATAATCTTCATCAGTCCCAGCTATCAAGCCCATCGGTGGATCAATATGATCATTATAGCACAGCCTTGCATAATGGGGATTTACTGAACCTAAGCCCCTCATCTGCAGAACAGCAAATTCTGATTCTGGCTAGACAACAAGCCCAGAGAGAGGAAGAGCTGGCAAGATCACAGCGGCATATCTTGGCTCTTCAAGAAGAAATTGAAGAACTTGAACGTGAAAATCGTCTTCATAGCCAACAGGAAGCAATGTTAAAGGCAGAACTTCGTAGCATGGATAGATCGAAAAAAAGGGAAGGAGTAGATATGACCTATTTGAAAAATGTCATTTTAAAGCTTCTTGAGACAGGTGAAGTGGAGACGCTATTGCCAGTCATTGCAATGCTACTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAAGCATATCGCAGCTCAACAGAAGTTCGTCCAAGTCCAGGAAGTGATTCTTCGGGATCTGGCCTATCTCTTTTCTCAAGATTCTCATTTTCATAG 2379 0.4128 MENHEGDPSKPEEQFSDRNHHNHGSYVNLVLQNGLSDDNSSQVDLDDQLLQLALELRFQNDFLKSQFEGFNSLNSVRSESSKGRKVGGPEEVQSDIIEELQERIQALNKELLDEKKTRGAAEEALKHLQLAYSEADVKAQELSEKLAAAEKKFDQEIKEREEKYTELDTKFNRLHKRAKQRIQEVQKEKDDIEVQLREVNEKAEQASSQQLSLQQELERTRQQANEALKAMDGDRQQLRSANNKLRDTIEDLRRSLQPKESALEALQQSLAEKEQMIEDMRGLLQAADEKKQAALTELSAKHQKNMESLEAQLSDAISDRNKAAETISSMQVLVAGKESKIAEVEAASTGEAARLRAAIESVKGELSHLKQEHEKEKENWSTAAQALKAKLEIAESNCIHAEIEVAKMRGQLESEVFAQTRILNTRDAELLSAKEEISRLENEFSSYKVRAHSLLQKKDAELAAAKDSEQLKALEEALKEAENEVLSIAEERDRALQDLQDATKIHEKELTERDTALENVKGQIRSLEMKFDSVNAQHLKEKEAWGLSLQNVEETWRIKYEAMKAETEGSSAHDMQLRKELEELKQKYKKLKEEHDSFRDLADRMIQEKDNEISRLLDDNNNLHQSQLSSPSVDQYDHYSTALHNGDLLNLSPSSAEQQILILARQQAQREEELARSQRHILALQEEIEELERENRLHSQQEAMLKAELRSMDRSKKREGVDMTYLKNVILKLLETGEVETLLPVIAMLLQFSPEEMQKCQQAYRSSTEVRPSPGSDSSGSGLSLFSRFSFS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00049 792 Gene3D GRIP domain 718 770 - -
Accr9g00049 792 SMART 1grip 719 763 IPR000237 -
Accr9g00049 792 MobiDBLite consensus disorder prediction 1 20 - -
Accr9g00049 792 Coils Coil 175 326 - -
Accr9g00049 792 Coils Coil 457 498 - -
Accr9g00049 792 MobiDBLite consensus disorder prediction 763 792 - -
Accr9g00049 792 Pfam GRIP domain 720 759 IPR000237 -
Accr9g00049 792 Coils Coil 517 537 - -
Accr9g00049 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 89 788 - -
Accr9g00049 792 Coils Coil 574 626 - -
Accr9g00049 792 Coils Coil 674 708 - -
Accr9g00049 792 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Accr9g00049 792 Gene3D - 228 386 - -
Accr9g00049 792 Coils Coil 90 159 - -
Accr9g00049 792 Coils Coil 423 450 - -
Accr9g00049 792 MobiDBLite consensus disorder prediction 1 23 - -
Accr9g00049 792 Coils Coil 352 404 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00049 - - gmx:100775990 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00049 9 564248 577029 Accr9g00049 9 564248 577029 ECH