Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00039 ATGTTCGTCAAGAAGCTGGTCGACAAAGCCTCCGTCAGGAAGCCTGGTGGGAATTCAGATGGGTTAAAAGCCAGCGATTTAGACGCACGTTTGGTTTTTCACTATGGGGTCCCATCCAACGGCGCCAAATTAGCTTATGACAATAATCAGAAGATTCTTGCTCTCTCTACAAAGGATGGCAGAATTAAACTATTTGGAAAAAATAACACTCAAGCCATCCTCCAATCTCCTAAGCCAGTGCCTAGCAGGTTTCTACAGTTCCTCCAGAATCAAGGCATCCTTATTAATGTCACTCTCAATAACCATATCGAGGTCTGGGACATTGACAAGAGGCAGTTGGCTGATGAATTCGTCGTTAAGGAAGCAATTACTTCCCTTGCTGTCATTCATCATAGCTTCTACATGTATATTGGAGATTCTGTTGGCAATATTTCGGTTTTCAGCTTGGATCAGGAACCCTGGCGGATAGTCCAGATGAAATACATCATCCCGCTATCAGCTTCTTATGGGAGTCCAAATGAAGTGTCAGATGATACTGCTGTGACACATATATTGCCTCAACCAGCAGCTGAAAGCAAGAGGGTTCTTATAATTTTTAGAAACGGCCAAATAATATTATGGGATATTCAAGAAAGCAAATCTATCTTCAGAATTGGTGGAAACATATCACAAGCATCCTATAATGAAACTAAGAAAGCGACTTCTGCATGCTGGGCATGTCCTTTTGGAAGTAAAGTGGTTGTAGGGTACAGCAATGGAGAGCTTTTAATTTGGAATATCTCTTCTCAAAACGTTGGGAATGATCCAGCATATGATTGTACCACTCAAAGCACTCCTATGCTCAAGCTTAACCTAGGATATAAATCAGATAAAATTCCCATTGACTCGGTTAAATGGATATATGCGGAAGCAAAGGCAAGTCGACTTTATGTCATCGGAGCTTCTGACACTGCATCTCCAAACTTAGTCCAGATAGTGTTACTGAATGAGAAGACAGAGTCTCGCACAATTAAGCTGGGCCTTCATTTGGCTGAATGTTGTATTGACATGGAGGTCTTGTCAACTTCAAGTGAGCAAAGCAAGCAGAAACAGGATTCTTTCATTTTGCTTGGGAAATCAGGCTGTGTTTATGTGTACGATGATAGTTTGATCGAAAGGTATCTTCTACAATGCCAGTCTAAGTCCTCGCCCTCACTGCCAAAGGAAGTGATGATTAAGTTGCCACTGTCAGATTCAAGCATCACGGCAGCAAAGTTCATCTCAGACAATCCTAATCTCCGAAATCCCGATGATGAGGAATATGTTCAGCTTCTGAAAAACTACCCACCTCTTATTCCCATTGAAGCAAAACACAAAGACATGGCTATTCTGAATTCTTCCAACTTCACCGGATTTTCAAAAGTAAAAAACTTGTACATAACTGGCCACAGTGACGGAGCCATAACTTTCTGGGATGCGTCGTGTCCCCTTTTCATCCCAATTTTGCAGTTGAAGCAACAGAGTGAACAGGAGTTTTCTACAAGTGGCATACCCTTAACAGCGTTGTATTTTGATACCAACACGCCTCTTCTTGTTTCTGGAGATCAGAGTGGAATGGTTCGCATCTTCAGATTCAAACCTGAACCTTATTCAAGCAACAGCTTCATATCTCTTACAGGAGGCACAAAAAAAGCTACTGATCATATAATTCACAGTGTGAAACTTGTAAAGACTGTTGGTGCTGTACTGTCCATGAACATAGATCACGGCTCAAAACATCTTGCTGTTGGTTCTGATCAAGGATATGTTTCAGTTATTGATATGAATGGCTCAACTTTGCTATATCAGAGACAAATCACAAGTGAGATTAGTACCGGCATCATCTCTCTACAGTTCCGACCATGCAGTTTGCAGGGTTTTAAGAAAAACGTTTTAGCTGTTGGAACAAAGGATTCATCTGTTTTGGCACTTGATAGTGATACTGGAAACCAAATGAGCACTGACACTATTCATCCTAAGAAGCCGTCTAGAGCTCTGCTAATGCAAGTGTTAGATGGACAAGGAGAATTAACCAAGGGATTGGGTACAAGCGAGGGGAATGATATTGATGATGTAACAACAAAGCAATTGTGCGTTTTGTTGTGTTCTGAGAAAGCTTTGTATGTCTATTCTTTTGTTCATGTTGTTCAGGGTGTTAAAAAGGTGCTTCACAAGAAGAAGTTTCATTCCTCATCTTGTTGCTGGGCGTCCACTTTCTACAGTCATTCTGATATTGGACTTATTCTCCTTTTCACCAATGGAAAATTAGAAATAAGGTCTTTGCCAGAATTGTCCCTTATCGTGGAGACCTCCATAAGAGATTTCGCTTATTCACCTCCGAAATTAAAGTCATTTTCTGATAGACAAATGTGCTGTTCATCCAAAGGAGATCTTGTTATGGTGAACGGTGACCAGGAAATTTTGGTTGCCTCAATGTTGGCCAACAGGGATATTTTCAGGCTTTTGGACTGCTTCAGCTGTATCTATAGGAAAGAATTATCACAAGAAGACATTGTCCCAACCCCAGTAATCCATAAGGAAAAGAAAAGGGGTATATTTAGCTCCGTTATCAAAGACTTTACTGGAAGTAAAGAAAAGCATGTGACCCTCTTGGAAACAGAAGATACGAAAGAAAGCATACAGCAACTCTCAGTGATCTTTTCTAATGCAAATTTTCCAAGTGACGGTGACAATAAAGATAACCTTACCATGGATGTGGATGAGCTTGAATTAAACATAGACGACATTGACCTGGAGGATCCTGGAGAAAAACGCAAAGATCAAAGGATACTAGGAACTCTCAATAAGAAGAATTTGGCTGGCAAATTTCAGGCTCTAAAAGGAAAGTGGAAAGACATGAAAGGCAACGTTCAGAAAACATCAGACAAGGAAGAGCAACAGGAAGAGAAAGGTGGTGCAGTTGATCAAATCAAGAAAAAATATGGGCATTCTTCTTCCTCCGATGAAACAAGCACTGCTAGATTGGCACAGAACAAGTTGCAGGAAAACATGTCGAAACTCCAGGGTATCAACCTTCGAACTACACAGATGCAGGATACAGCAAAATCATTTTCATCATTGGCAAAACAGGTCCTGCGAACTGCCGAACAGGACAAACGTTGA 3141 0.4094 MFVKKLVDKASVRKPGGNSDGLKASDLDARLVFHYGVPSNGAKLAYDNNQKILALSTKDGRIKLFGKNNTQAILQSPKPVPSRFLQFLQNQGILINVTLNNHIEVWDIDKRQLADEFVVKEAITSLAVIHHSFYMYIGDSVGNISVFSLDQEPWRIVQMKYIIPLSASYGSPNEVSDDTAVTHILPQPAAESKRVLIIFRNGQIILWDIQESKSIFRIGGNISQASYNETKKATSACWACPFGSKVVVGYSNGELLIWNISSQNVGNDPAYDCTTQSTPMLKLNLGYKSDKIPIDSVKWIYAEAKASRLYVIGASDTASPNLVQIVLLNEKTESRTIKLGLHLAECCIDMEVLSTSSEQSKQKQDSFILLGKSGCVYVYDDSLIERYLLQCQSKSSPSLPKEVMIKLPLSDSSITAAKFISDNPNLRNPDDEEYVQLLKNYPPLIPIEAKHKDMAILNSSNFTGFSKVKNLYITGHSDGAITFWDASCPLFIPILQLKQQSEQEFSTSGIPLTALYFDTNTPLLVSGDQSGMVRIFRFKPEPYSSNSFISLTGGTKKATDHIIHSVKLVKTVGAVLSMNIDHGSKHLAVGSDQGYVSVIDMNGSTLLYQRQITSEISTGIISLQFRPCSLQGFKKNVLAVGTKDSSVLALDSDTGNQMSTDTIHPKKPSRALLMQVLDGQGELTKGLGTSEGNDIDDVTTKQLCVLLCSEKALYVYSFVHVVQGVKKVLHKKKFHSSSCCWASTFYSHSDIGLILLFTNGKLEIRSLPELSLIVETSIRDFAYSPPKLKSFSDRQMCCSSKGDLVMVNGDQEILVASMLANRDIFRLLDCFSCIYRKELSQEDIVPTPVIHKEKKRGIFSSVIKDFTGSKEKHVTLLETEDTKESIQQLSVIFSNANFPSDGDNKDNLTMDVDELELNIDDIDLEDPGEKRKDQRILGTLNKKNLAGKFQALKGKWKDMKGNVQKTSDKEEQQEEKGGAVDQIKKKYGHSSSSDETSTARLAQNKLQENMSKLQGINLRTTQMQDTAKSFSSLAKQVLRTAEQDKR 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00039 1046 CDD R-SNARE_STXBP5_6 982 1039 - -
Accr9g00039 1046 SUPERFAMILY WD40 repeat-like 44 608 IPR036322 GO:0005515
Accr9g00039 1046 MobiDBLite consensus disorder prediction 959 999 - -
Accr9g00039 1046 Gene3D - 28 161 IPR015943 GO:0005515
Accr9g00039 1046 Gene3D - 451 758 IPR015943 GO:0005515
Accr9g00039 1046 SUPERFAMILY WD40 repeat-like 571 801 IPR036322 GO:0005515
Accr9g00039 1046 SMART WD40_4 498 537 IPR001680 GO:0005515
Accr9g00039 1046 SMART WD40_4 565 600 IPR001680 GO:0005515
Accr9g00039 1046 SMART WD40_4 220 259 IPR001680 GO:0005515
Accr9g00039 1046 SMART WD40_4 110 148 IPR001680 GO:0005515
Accr9g00039 1046 SMART WD40_4 400 485 IPR001680 GO:0005515
Accr9g00039 1046 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 5 1040 - -
Accr9g00039 1046 Gene3D - 175 300 IPR015943 GO:0005515
Accr9g00039 1046 MobiDBLite consensus disorder prediction 959 991 - -
Accr9g00039 1046 Coils Coil 905 925 - -
Accr9g00039 1046 Pfam Lethal giant larvae(Lgl) like, C-terminal 721 824 IPR013905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00039 Accr-Chr9 412108 420734 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00039 - - gmx:100793138 1514.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00039 9 412108 420734 Accr9g00039 9 412108 420734 ECH