Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00035 ATGGCGAGCATAAGGCCTTTGCCCGAGGATGTTCGTAGTTCGTTGCGTTCTGGCTTTTTCTTGTTCGACTTGACGAGGGTTGTGGAAGAACTGGTTTTCAATAGCCTGGATGCTGGCGCAACGAAGGTCTCAATCTTTGTTAGTGTCAGGAGCTGTTACATCAAAGTAGTGGACGATGGAGTTGGTATTACTCGAGACGGATTGATGTTGGTTGGAGAAAGATACGCAACATCAAAGTTACTTAGTTTGGCTGATCTGAATGGCACAAGTGGAAACTTTGGTTTTCGGGGAGAAGCTTTAGCTTCGATTTCAGAAGTTTCACTGTTGGAAATTTTGACAAGAACTTTTGGAAGAGCAAATGGATATCGCAAAGTATTGAAGGGCTGCAAGTGTCTATATCTTGGTATAGATGATGATAGAAAGGAAGTGGGAACAACAGCTGTTGTCCGTGATTTATTTCACAACCAACCAGTTCGGAGGAAACATATGCAATCCAGCCCAAAGAAGGTTCTGCAATCAGTCAAGAAAAGTATGCTGCGGCTCGCACTTGTCCGTCCAAATATTTTGTTCAAAGTTGTTGATATTGAAAGTGAGGATGAACTTCTTTGCACACATTCTTCTTCTCCGCTGTCACTTTTAACCAGTGGCTTTGGGATGGAGGTCTCAAGCTCTCTTAATGAATTACAAGATCAGGATGATCTCATAAAGCTTTCAGGATATATATCTGGCCCCTGCAATAGTTTTACTCTAAAGGCCTTGCAGTATATCTATATTAACTCACAGTTTATCAGCAAAGGCCCAATTCATAAGCTTCTAAGTCAACTGGCTGTTAGGTTTGAGCATCTGGACTCACAGAATGCAGGTGACAAGTTCCAGAACAAGAAGAGAAGTAGATCTCAAGCATATCCAGCTTATATCTTGAATTTGCTTTGTCCACGGTCTCTGTATGATTTAACCTTTGAGCCGTCAAAGACTTCTGTTCAATTTAAGGATTGGACTTCCGTACTGAACTTCATTGAGAAGGCCATCAAAAATTTCTGGGGGAAGAACATAACTCATGGAGAGTCTTCTAATGCCACTCGTGTGGTACAAGCAGGTCAGCCGTGCAAGGAAATTGACAATGCCATTTTGGCTGAAGCTGACATAACGAATTGTGGAAACCAAAAGAGTAAGGAATTCATTGACCTTTTCTTTTCCCCTTCAGACAAGTTAGCTGAAGATGACCTTTACCCATCTGATGGGCAAGTCATTAGATCCTCCCTGTATTATTTGCCCAGTGATGCTACAAAGTTCAAAGAGAAACAAAATAAGAGAAACTTTCTATGTCAGACTGGTTACTCTGGCTTTTCAATGGATGAATCATATAACAAGTGTGGCTCCACTGTGACTAAAAATCATTGCAGTGTGTGGAATGATAACTGTCTATCTGGAAGAGATGATTTCTTGGATGGTGAGTTTGTTGCTGGAGGAATCTTCAATGATAATGTATCGTTTGATGTGCCAAGCTCATCAAAGGGAAAGAAATTTTTTGAAGTTGATGATGATAAGCTCAGTGAACTGTCCCAAGGTGCCTTGCATTATGGCTGTCATGAGCTCTGTAAAGATGTAGTGATTGACAGGGATTTTCAAAAGCCTTTTCTGAAGAGTTGCTCTATACGAGGTAGTATTCTGCAAGAGAAGGCCTTGTATGCAAATGATGAACATGTGTTTCAAATTGATGGCTATAGCACCAAACAAGATCTGGGAGCGTGCAGGGGCAGAGTTGAGAACTTAGGTGCACATCCTTCTCCAGAAGTTGTAGAAATATTCAACACATCTAGAGATTCTGTTTTTCTCTCGAGAGCATCTACTGAAGAAAAATGTTTTACTTCAGATTCATGCTCTTTGGCAACACAAATGGGATGCCCTGGGTCTGCTGAAGAAGAGTGTTTTCCTTCAGATTCAAGCTATCCAGAGTTGTTGACACCTGAACGTTACCCTGTCTTCAAGACACTGTCACCTGAAGCCACTGCATGGGATGTTAACCGTATGACAGATGAGTCAGACTGGTTGTGTCCAGAGTCATGTGGTGGGAACTACCAAAGACTTAGCAAGAACAGGATCAAAAGGGATCATGTTAGATATCCAGCTTCAGAAAAGAATCATGGAAGATCTAGGAGAAGCTTTTCAGCCCCTCCATTTCACAAAAGCAGAAAAAGGTTTAATTCTTTAAATCAACCTTTAACATTGATAGCCAAAAGACCTGCAGGCCAAAACTCCAACTGTGCGTTAAAGAATAGAGAAGCTGATGAAAAGTGTCCCCTGCGATATTCTGGACCACGTCATCCAACCCCTGAGGAACATCTGTTGCTTGAAAATAATTCCAGTATGAAGAAGAAAACAGCTACTATACAGCAGGTTAATAGCATAAAAGAGTCTGAATGGTTTCAAAGTTCAAATAGTCAAAGCAATGGTCCACTAAAAGAATTGACATCAATAAAAGTGGAAGATTCTATGGATTACAGGACAAAATGGCGAAACTGCTCACTCCAAATTCCAACAAGGGATAAATCACTTGATTTTCATAGTCAAGAAGATATACTTGACATATCTTCTGGATTGTTGCATCTTGCTGGTGATTCATTAGTACCTGAAACTATCAGTAAGAGCTGCCTTGAGAATGCCAAAGTTCTTCATCAGGTGGATAAGAAATTCATTCCTGTTGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAGAGAATCAGATTGGAAGAATTGCGTCAAAAGGTATTATCAGGAGAAGCAAGGACAATAAACTATCTAGATACTGAACAGGAACTGGTGCTGCCTGAGATTGGCTATCAACTATTGCACAGTTATTCTGAACACATTAAAGTTTGGGGATGGATCTGTAACATTCATGCTCAAGATTCAAAATCGTTCAAGCAGAATTTGGATATTCTCAACAGGCAGCCAGCTGTTGCATCACTTATTGCGGTACCCTGCATTTTAGGTGTCAACTTAAATGATATTGATCTTATGGAATTTCTTCAGCAGCTTGCGGACACGGATGGATCATCAACAGTGCCACCCTCTGTTGTACGAGTTCTTAATTCCAAAGCGTGCAGAGGTGCAATTATGTTTGGAGACTCGTTGCTGCCATCTGAATGTTCGCTCATCGTTGAAGAGCTAAAACAAACGTCACTTTGTTTCCAATGTGCTCACGGGCGGCCAACAACTGTTCCTCTTGTCAGCTTGGAGGCGCTGCATAATCAGATGGCCAAGCTCGGACTAATGATTGATTGCTCAAATGATGAGTGGCATGGACTACGAAGACATAAAATTAGTGTTCAGCGTGCGGCACAACGTTTATGTTCCTCTGGAGAATAG 3384 0.4143 MASIRPLPEDVRSSLRSGFFLFDLTRVVEELVFNSLDAGATKVSIFVSVRSCYIKVVDDGVGITRDGLMLVGERYATSKLLSLADLNGTSGNFGFRGEALASISEVSLLEILTRTFGRANGYRKVLKGCKCLYLGIDDDRKEVGTTAVVRDLFHNQPVRRKHMQSSPKKVLQSVKKSMLRLALVRPNILFKVVDIESEDELLCTHSSSPLSLLTSGFGMEVSSSLNELQDQDDLIKLSGYISGPCNSFTLKALQYIYINSQFISKGPIHKLLSQLAVRFEHLDSQNAGDKFQNKKRSRSQAYPAYILNLLCPRSLYDLTFEPSKTSVQFKDWTSVLNFIEKAIKNFWGKNITHGESSNATRVVQAGQPCKEIDNAILAEADITNCGNQKSKEFIDLFFSPSDKLAEDDLYPSDGQVIRSSLYYLPSDATKFKEKQNKRNFLCQTGYSGFSMDESYNKCGSTVTKNHCSVWNDNCLSGRDDFLDGEFVAGGIFNDNVSFDVPSSSKGKKFFEVDDDKLSELSQGALHYGCHELCKDVVIDRDFQKPFLKSCSIRGSILQEKALYANDEHVFQIDGYSTKQDLGACRGRVENLGAHPSPEVVEIFNTSRDSVFLSRASTEEKCFTSDSCSLATQMGCPGSAEEECFPSDSSYPELLTPERYPVFKTLSPEATAWDVNRMTDESDWLCPESCGGNYQRLSKNRIKRDHVRYPASEKNHGRSRRSFSAPPFHKSRKRFNSLNQPLTLIAKRPAGQNSNCALKNREADEKCPLRYSGPRHPTPEEHLLLENNSSMKKKTATIQQVNSIKESEWFQSSNSQSNGPLKELTSIKVEDSMDYRTKWRNCSLQIPTRDKSLDFHSQEDILDISSGLLHLAGDSLVPETISKSCLENAKVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEARTINYLDTEQELVLPEIGYQLLHSYSEHIKVWGWICNIHAQDSKSFKQNLDILNRQPAVASLIAVPCILGVNLNDIDLMEFLQQLADTDGSSTVPPSVVRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVSLEALHNQMAKLGLMIDCSNDEWHGLRRHKISVQRAAQRLCSSGE 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00035 1127 Gene3D - 934 1045 IPR042121 -
Accr9g00035 1127 MobiDBLite consensus disorder prediction 711 731 - -
Accr9g00035 1127 NCBIfam DNA mismatch repair endonuclease MutL 4 350 IPR002099 GO:0005524|GO:0006298|GO:0030983
Accr9g00035 1127 Pfam DNA mismatch repair protein, C-terminal domain 216 345 IPR013507 GO:0005524|GO:0006298|GO:0030983
Accr9g00035 1127 Gene3D - 2 207 IPR036890 -
Accr9g00035 1127 SUPERFAMILY DNA mismatch repair protein MutL 889 1081 IPR037198 -
Accr9g00035 1127 Pfam MutL C terminal dimerisation domain 889 1050 IPR014790 GO:0005524|GO:0006298
Accr9g00035 1127 SMART DNA_mis_repair_2 213 348 IPR013507 GO:0005524|GO:0006298|GO:0030983
Accr9g00035 1127 SUPERFAMILY Ribosomal protein S5 domain 2-like 204 348 IPR020568 -
Accr9g00035 1127 SMART MutL_C_2 890 1050 IPR014790 GO:0005524|GO:0006298
Accr9g00035 1127 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22 199 IPR036890 -
Accr9g00035 1127 Gene3D - 893 1081 IPR042120 -
Accr9g00035 1127 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 118 - -
Accr9g00035 1127 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Accr9g00035 1127 FunFam MUTL protein homolog 3 934 1045 - -
Accr9g00035 1127 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1086 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Accr9g00035 1127 FunFam DNA mismatch repair endonuclease MutL 1 213 - -
Accr9g00035 1127 Gene3D - 213 352 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00035 Accr-Chr9 391907 401371 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00035 K08739 - cave:132170703 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00035 9 391907 401371 Accr9g00035 9 391907 401371 ECH