Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02497 ATGAGTTTGCCATTTCCTCTAGCAGCAAACGCTTCCATCAATGGAAGCCATATCAGTGTGAGCAAATCAATTGGTAGAATAAGAGTTGGTGTAATAAGAGCACAAGTGACCTTGGCTCCAAAACCAACAGGGGATATCAGTTATCCCCAGTTGTCAAAACAAGGAATTTTTCTTGCTGATCTGCACGTACAAGAAGTTGTGGAGAGGCAGACTCAGCCGGCTAAGTTCATCACCATTCCTCGCCAGAAGCCGCAGTTTCGTCCAGGCTTTATAGAGGAAGCATATGAAAGCTGCAGAAAGATCTGTGCAGAATATGCCAAGACCTTCTATCTAGGAACTCTGCTAATGACAGAAGAAAGAAAGAAAGCTATATGGGCGATTTATGTTTGGTGCAGGAGGACAGATGAATTGGTTGATGGTCCTAATGCGGCCTATATGAGCTCTACTGTTCTTGATAGGTGGGAGGAGAGACTGCATGACATTTTCAACGGACGCCCTTATGACATGCTTGATGCTGCTCTGACCGACACTGTTTCTATGTTTCCCTTGGACATTAAGCCTTTCAGGGACATGATAGAAGGCATGAGGATGGATACAAGGAAAACCCGGTACAAGAATTTTGAAGAGCTACATCAATACTGCTACTATGTGGCCGGAACTGTTGGCCTAATGAGTGTTCCAGTCATGGGAATTGCGGCAGAGTCTCTTCTCCCTGCTCAAACTATATATAATGCAGCACTCTATTTGGGTCTTGGGAATCAACTGACAAACATTCTCAGAGACGTGGGAGAGGATGCATCAAGGGGTAGGGTTTACCTTCCCCAAGATGAACTAGCCCAGTTTGGCTTGAGTGACAAGGATATTTTCTCAAGAACTGTGACTGAAGAATGGAAGGTGTTCATGAAACACCAGATAAGCAGGGCAAGATTCTACTTCAAATTGGCAGAGGAAGGAGCTTCTCAGCTTGAGAAGGCCAGCCGTTGGCCGGTTTGGTCGTCGTTAATAATATACGGCAAGATCCTGGACGCAATCGAAGACAACGAATATGACAACTTGACAAGAAGGGCATACGTAGGAAGGGCTAAGAAACTCATGATGTTGCCTCTAGCTTTCACCAGATCTCTCTCCTTCTCTCTCAATCTCAAGGATCAACACACACTCTCCCCCTTCAACAACAAACTTCAATAA 1188 0.4503 MSLPFPLAANASINGSHISVSKSIGRIRVGVIRAQVTLAPKPTGDISYPQLSKQGIFLADLHVQEVVERQTQPAKFITIPRQKPQFRPGFIEEAYESCRKICAEYAKTFYLGTLLMTEERKKAIWAIYVWCRRTDELVDGPNAAYMSSTVLDRWEERLHDIFNGRPYDMLDAALTDTVSMFPLDIKPFRDMIEGMRMDTRKTRYKNFEELHQYCYYVAGTVGLMSVPVMGIAAESLLPAQTIYNAALYLGLGNQLTNILRDVGEDASRGRVYLPQDELAQFGLSDKDIFSRTVTEEWKVFMKHQISRARFYFKLAEEGASQLEKASRWPVWSSLIIYGKILDAIEDNEYDNLTRRAYVGRAKKLMMLPLAFTRSLSFSLNLKDQHTLSPFNNKLQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02497 395 ProSitePatterns Squalene and phytoene synthases signature 2. 249 274 IPR019845 GO:0016765
Accr8g02497 395 FunFam Phytoene synthase chloroplastic 87 369 - -
Accr8g02497 395 SUPERFAMILY Terpenoid synthases 94 376 IPR008949 -
Accr8g02497 395 Gene3D Farnesyl Diphosphate Synthase 89 369 IPR008949 -
Accr8g02497 395 SFLD Squalene/Phytoene Synthase Like 92 374 IPR002060 GO:0009058
Accr8g02497 395 Pfam Squalene/phytoene synthase 105 360 IPR002060 GO:0009058
Accr8g02497 395 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 45 375 - -
Accr8g02497 395 CDD Trans_IPPS_HH 96 363 IPR033904 GO:0004311
Accr8g02497 395 ProSitePatterns Squalene and phytoene synthases signature 1. 213 228 IPR019845 GO:0016765
Accr8g02497 395 SFLD Phytoene synthase like 92 374 IPR044843 GO:0004311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02497 Accr-Chr8 48714241 48716186 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02497 K02291 - qsa:O6P43_022003 548.51