Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02490 ATGGACTTACCACTCCCTTCCTGCTACTTCCTCCTCTTTCTTCTCCTCATTCCTCATTTCGCTTCCTCCGATTTAGCCAAGGACCGCCAACAGTGTGCCGATCAACTCATCGGCCTCGCTCCCTGTCTCTCCTACGTCAGCGGCGAGGCCAAAACTCCCACCATCGATTGCTGTACCGGTCTCAAACAGGTCGTCGACAAGAGTAAGAAGTGCCTCTGCCTCCTCATTAAATACCGCAACGAACCCGACCTCGGCTTCACCCTCAACGCCTCCCTCGCCGTCAACCTCCCCTCCGCCTGCCACGCCCCCGCCAACATCTCTCAGTGCGTCGATCTTTTGCATTTGGCTCCTAACTCTTCCGAGGCAAAGGTCTTCGAGGGCTTTGATAAAGCCACTCACCCGAACACTTCCAGTTCCACCCCACCCGCGCCTGCTGGGAAGGGATCGAGCCCCTCCAGCACGAGCGCCGATGAGAAGAACGGCGGCGTCTCAGTGGCTGTGTGGGAAAAGAGGCGGTTGGTGGCTAAAGTGGCTTGGGTGATTATTATACCCTTGGTTGTTACCCTGCGCGTTTGA 576 0.5694 MDLPLPSCYFLLFLLLIPHFASSDLAKDRQQCADQLIGLAPCLSYVSGEAKTPTIDCCTGLKQVVDKSKKCLCLLIKYRNEPDLGFTLNASLAVNLPSACHAPANISQCVDLLHLAPNSSEAKVFEGFDKATHPNTSSSTPPAPAGKGSSPSSTSADEKNGGVSVAVWEKRRLVAKVAWVIIIPLVVTLRV 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02490 191 PRINTS Plant phospholipid transfer protein signature 52 66 IPR000528 GO:0006869|GO:0008289
Accr8g02490 191 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Accr8g02490 191 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Accr8g02490 191 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 110 IPR036312 -
Accr8g02490 191 MobiDBLite consensus disorder prediction 130 161 - -
Accr8g02490 191 MobiDBLite consensus disorder prediction 131 160 - -
Accr8g02490 191 SMART aai_6 32 109 IPR016140 -
Accr8g02490 191 Pfam Probable lipid transfer 25 109 IPR016140 -
Accr8g02490 191 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 29 109 - -
Accr8g02490 191 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 23 150 IPR043325 -
Accr8g02490 191 Gene3D - 29 109 IPR036312 -
Accr8g02490 191 CDD AAI_LTSS 39 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02490 Accr-Chr8 48623799 48624534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02490 11 167 Acyl Lipid Metabolism Gene Families AT2G44290 46.541 1.45e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02490 - - pvu:PHAVU_001G268300g 197.593