Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02478 ATGGTGAAGAAGCGGGTCCCCGACTGGCTCAACAGTTCTCTCTGGTCTTCCACTCCTTCCTCTGACGACCACCGTGATCTCCGCCACTCCACCACCGCATCCACCAACACCTACGCCGATGAAGACCGAGAGCAATCCGCGGTGGACCCACCTTTACCTGCACCTTCTCCTCCTTCACCACCGGTCAGAGAAGATCCTCCACAGCCCCAGATAATCGAAGATTCAAGAACCAATCATCTTGCTAACGATTACAATGTCACTTCTTCTACTCCTTCTACAGATGACATCTCTCGCCAGGCTCAATTGCTGGCCGAGCTATCAAGAAAGGTGATAGATATAAGGGAGCTGCGGAGAATTGCATGTCAAGGTATACCTGATGGTGCTGGGATACGTTCTACTGCGTGGAAGCTTTTGCTTGGATATCTTCCACTGGATCGAGGTCTTTGGTCATCTGAATTAGCTAAGAAAAGGTCTCAATATAAGCATTTCAAAGAGGAGATCCTGATGAATCCTTCAGAAATTACAAGGAGGATGTGCAGCTCTACAAGTGACACTTCTGATGCAAAATGTGGGAGTCGAGGCTTGCTCTCTAGATCTGAAGTCACTCATGGGGAACATCCCTTGAGTCTTGGAAAGACTAGCATATGGAATCAGTTCTTCCAGGACACTGAGATAATAGAGCAAATTGATCGAGATGTAAAGCGCACTCATCCTGATATGAATTTTTTTTCCGGTGACTCGCAGTTTGCAAAGTCCAATCAGGAGGCTCTGAAGAACATATTAATTATTTTTGCAAAGTTAAATCCAGGCATAAGATATGTTCAAGGGATGAATGAGATAGTGGCTCCTCTGTTCTATGTGTTTAAAAATGATTCTGATGAAGAAAATCCAGCCTTTGTCGAAGCAGACACATTCTTTTGTTTTGTCGAGCTATTAAGTGGGTTCCGAGATAATTTTTGTCAACAACTTGACAACAGTGTTGTGGGAATCCGTTCCACTATTGCTCGGTTATCACAGCTTTTGAGACAACATGATGAAGAGCTGTGGCGTCATCTTGAGATCACAACCAAAGTCAATCCCCAATTCTATGCGTTTAGGTGGATTACTCTCCTCTTGACTCAGGAATTCAATTTTGCTGACTGCCTTTTCATTTGGGACACTCTTCTAAGTGATCCAGAAGGTCCACAGGAGACTCTGTTACGGATATGCTGTGCAATGCTAATTATTGTTCGGAGACGCCTTCTCGCGGGTGATTTCACGTCCAATCTCAAGTTGCTGCAAAATTACCCGTCTACTAACATAAGCCATTTGCTCTATGTTGCCAATAAGTTACGGGTACAAGGAATCTAA 1350 0.4459 MVKKRVPDWLNSSLWSSTPSSDDHRDLRHSTTASTNTYADEDREQSAVDPPLPAPSPPSPPVREDPPQPQIIEDSRTNHLANDYNVTSSTPSTDDISRQAQLLAELSRKVIDIRELRRIACQGIPDGAGIRSTAWKLLLGYLPLDRGLWSSELAKKRSQYKHFKEEILMNPSEITRRMCSSTSDTSDAKCGSRGLLSRSEVTHGEHPLSLGKTSIWNQFFQDTEIIEQIDRDVKRTHPDMNFFSGDSQFAKSNQEALKNILIIFAKLNPGIRYVQGMNEIVAPLFYVFKNDSDEENPAFVEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTIARLSQLLRQHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADCLFIWDTLLSDPEGPQETLLRICCAMLIIVRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRVQGI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02478 449 MobiDBLite consensus disorder prediction 50 67 - -
Accr8g02478 449 ProSiteProfiles TBC/rab GAP domain profile. 125 392 IPR000195 -
Accr8g02478 449 MobiDBLite consensus disorder prediction 71 95 - -
Accr8g02478 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 104 351 IPR035969 -
Accr8g02478 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 329 446 IPR035969 -
Accr8g02478 449 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 93 427 - -
Accr8g02478 449 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 211 320 - -
Accr8g02478 449 SMART tbc_4 120 418 IPR000195 -
Accr8g02478 449 Pfam Rab-GTPase-TBC domain 222 413 IPR000195 -
Accr8g02478 449 FunFam TBC1 domain family member 13 209 320 - -
Accr8g02478 449 MobiDBLite consensus disorder prediction 1 95 - -
Accr8g02478 449 FunFam TBC1 domain family member 13 327 448 - -
Accr8g02478 449 Gene3D - 328 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02478 Accr-Chr8 48532892 48536929 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02478 K24796 - qsa:O6P43_003797 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g02478 8 48532892 48536929 Accr8g02478 8 48532892 48536929 ECH