Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02398 ATGGGGGTAACTAAAAGTTGGGTTCTGCTTTTTCTAGCTCTGGTATTGCTGAACCACCTGGTTGTGAATGGGGATGAGAATACGAAGACTCTGGTGAAGTATAAGAAGGGGAAGAAGCTTTGCGACAAAGGGTGGGAATGCAAGGGATGGTCCCAATACTGCTGTAATCTGACTATCACTGATTACTTCCAGACCTACCAGTTTGAGAATCTCTTTTCTAAGCGTAACTCACCTGTGGCGCACGCAGTAGGTTTCTGGGATTATCATTCTTTCATTTTTGCTGCTGCACTTTTTGAGCCATTGGGCTTCGGCACCACCGGTAATAAGACCATGCAGATGATGGAAATTGCAGCTTTCTTGGGTCATGTCGGCAGTAAAACTTCTTGTGGTTATGGAGTGGCCACTGGAGGACCTTTGGCCTGGGGTCTTTGTTACAATCACGAAATGAGTCCTAGTCAGTCATACTGTGATGACTATTTCAAGTACACCTACCCTTGTGCCCCCGGCGCTGAGTATTATGGACGTGGTGCCCTGCCTATCTTCTGGAACTACAACTATGGTGCTGCTGGAGAAGCTTTGAAGGTAGATCTGCTAAATCATCCAGAATATGTTGAGCAGAATGCAACCCTGGCTTTCCAGGCTGCAATTTGGAGGTGGATGACCCCAATCAAGAAGAAGCAACCTTCGGCACACGACGCCTTTGTTGGCAACTGGAAGCCAACCAAGAACGACACGATAGCAAAACGTCTTCCTGGTTTTGGCACCACAATGAACATTCTTTATGGCGATGGTCTGTGTGGGCAAGGTGATGTTGACTCCATGAACAACATCGTTTCCCATTACCTGTATTATCTCGATCTGCTTGGTGTTGGCCGTGAGGAGGCAGGGCCCCATGAATTGCTTACTTGTGCCGAGCAGGTTCCTTTCAACCCATCATCTCCTACCGCCACTGCTGCTTCTTGA 963 0.4787 MGVTKSWVLLFLALVLLNHLVVNGDENTKTLVKYKKGKKLCDKGWECKGWSQYCCNLTITDYFQTYQFENLFSKRNSPVAHAVGFWDYHSFIFAAALFEPLGFGTTGNKTMQMMEIAAFLGHVGSKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDYFKYTYPCAPGAEYYGRGALPIFWNYNYGAAGEALKVDLLNHPEYVEQNATLAFQAAIWRWMTPIKKKQPSAHDAFVGNWKPTKNDTIAKRLPGFGTTMNILYGDGLCGQGDVDSMNNIVSHYLYYLDLLGVGREEAGPHELLTCAEQVPFNPSSPTATAAS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02398 320 SUPERFAMILY Lysozyme-like 59 310 IPR023346 -
Accr8g02398 320 CDD chitinase_GH19 67 290 - -
Accr8g02398 320 FunFam Endochitinase (Chitinase) 147 206 - -
Accr8g02398 320 Pfam Chitinase class I 67 293 IPR000726 GO:0004568|GO:0006032|GO:0016998
Accr8g02398 320 Gene3D Endochitinase, domain 2 147 206 - -
Accr8g02398 320 PIRSF Endochitinase 1 310 IPR016283 GO:0004568|GO:0005975
Accr8g02398 320 PANTHER CHITINASE-RELATED 9 306 - -
Accr8g02398 320 Gene3D - 67 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02398 Accr-Chr8 47589759 47591964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02398 6 313 Glycoside Hydrolase AT1G05850 74.351 9.38e-180 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02398 - - gmx:100811072 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g02398 8 47589759 47591964 Accr8g02398 8 47589759 47591964 ECH