Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01792 ATGGCGATGTCTCTGGCTCAGCAATTCACCGCTCTCCGCTGCTGTTCTCCTCTCTCTTCTTCTCCTCGCTCTAAACCTTTCTCTGCTCCCAACAACCATAAGCGTAATCCCCTTCCCATTGTCGCCTCCGTCGCCATCTCTAATGCGCAGACCAGAGAGAGGGAAAATCTCAAACAGCTCTTCGAAGAAGCCTACGAGCGTTGCCGCACTATTCCCATGGAAGGCGTTTCCTTCACTATCGAAGAGTTTGATTCTGCTCTCGATAAGTATGACTTCGATTCTGAAATTGGCACCAAGGTTAAAGGCACTGTTTTCAATGTAGATGCTAATGGAGCTTATGTTGACATTACTGCAAAGTCGTCAGCATACCTGCCCCTCCAAGAGGCATGCATCCACAGAATTAAACATGTACAAGAAGCAGGCATAGTTCCTGGATTGAGAGACGAGTTTGTAATCATTGGTGAAAACGAAGTTGACGACAGCTTGATCTTGAGTTTAAGGAGTATGCAGTACGACCTTGCTTGGGAACGCTGTAGACAACTTCAAGCAGAAGATGTTGTTGTCAAGGGTAAGGTTCTCGGTGCTAATAAAGGTGGAGTTGTGGCTTTGGTTGAAGGCCTTAGAGGGTTTGTTCCGTTCTCACAAATATCATCGAAATCAACGGCAGAAGAGCTTCTAGAAACGGAGCTTCCTCTGAAGTTTGTGGAGGTGGATGAGGAGCAGTCTAGACTTATTCTCAGTAACCGCAAAGCCATGGCTGACAGCCAGGCACAGCTGGGCATTGGATCAGTGGTCACTGGCTCTGTTCAAAGTCTGAAGCCATATGGTGCCTTCATTGACATTGGTGGAATTAATGGCCTTCTTCATGTCAGTCAGATCAGTCATGATCGGGTAACTGATATCTCTACTGTTCTTCAACCTGGTGATACCCTCAAGGTGATGATCTTAAGTCATGATCGGGAGAGAGGCCGAGTAAGTCTTTCCACAAAGAAGTTGGAACCCACACCAGGAGACATGATTCGCAATCCTAAGCTTGTCTTTGAGAAGGCTGAGGAGATGGCCCAAACATTCAGACAGAGAATTGCCCAAGCTGAAGCTATGGCTCGTGCAGACATGCTTAGGTTCCAGCCTGAGAGTGGATTAACTCTCAGCAGTGATGGGATACTGGGACCATTTTCTTCAGACTTGCCTGCAGAGGGACTGGATTTGAGTGAAGTGCCCCCCGCCGATGAATTAGAATCGGAAGACGCAGACGCAGACGAAGACGAAGACGCAGAAGAAGAATAA 1287 0.4755 MAMSLAQQFTALRCCSPLSSSPRSKPFSAPNNHKRNPLPIVASVAISNAQTRERENLKQLFEEAYERCRTIPMEGVSFTIEEFDSALDKYDFDSEIGTKVKGTVFNVDANGAYVDITAKSSAYLPLQEACIHRIKHVQEAGIVPGLRDEFVIIGENEVDDSLILSLRSMQYDLAWERCRQLQAEDVVVKGKVLGANKGGVVALVEGLRGFVPFSQISSKSTAEELLETELPLKFVEVDEEQSRLILSNRKAMADSQAQLGIGSVVTGSVQSLKPYGAFIDIGGINGLLHVSQISHDRVTDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPFSSDLPAEGLDLSEVPPADELESEDADADEDEDAEEE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01792 428 MobiDBLite consensus disorder prediction 384 428 - -
Accr8g01792 428 Coils Coil 409 428 - -
Accr8g01792 428 SUPERFAMILY Nucleic acid-binding proteins 261 340 IPR012340 -
Accr8g01792 428 ProSiteProfiles S1 domain profile. 262 330 IPR003029 GO:0003676
Accr8g01792 428 Coils Coil 347 367 - -
Accr8g01792 428 CDD S1_RPS1_repeat_hs4 262 330 - -
Accr8g01792 428 CDD S1_RPS1_repeat_ec2_hs2 185 249 - -
Accr8g01792 428 SMART S1_6 183 249 IPR022967 -
Accr8g01792 428 SMART S1_6 260 330 IPR022967 -
Accr8g01792 428 SMART S1_6 95 167 IPR022967 -
Accr8g01792 428 Gene3D - 79 179 IPR012340 -
Accr8g01792 428 Gene3D - 180 255 IPR012340 -
Accr8g01792 428 FunFam 30S ribosomal protein S1 81 178 - -
Accr8g01792 428 SUPERFAMILY Nucleic acid-binding proteins 92 192 IPR012340 -
Accr8g01792 428 Gene3D - 256 334 IPR012340 -
Accr8g01792 428 ProSiteProfiles S1 domain profile. 97 167 IPR003029 GO:0003676
Accr8g01792 428 Pfam S1 RNA binding domain 183 247 IPR003029 GO:0003676
Accr8g01792 428 Pfam S1 RNA binding domain 261 330 IPR003029 GO:0003676
Accr8g01792 428 MobiDBLite consensus disorder prediction 406 428 - -
Accr8g01792 428 PANTHER 30S RIBOSOMAL PROTEIN S1 53 402 - -
Accr8g01792 428 FunFam 30S ribosomal protein S1, chloroplastic 179 255 - -
Accr8g01792 428 SUPERFAMILY Nucleic acid-binding proteins 180 253 IPR012340 -
Accr8g01792 428 ProSiteProfiles S1 domain profile. 185 249 IPR003029 GO:0003676
Accr8g01792 428 FunFam 30S ribosomal protein S1 258 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01792 K02945 - qsa:O6P43_021900 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01792 8 40303404 40306888 Accr8g01792 8 40303404 40306888 ECH