Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01780 ATGACGTTTGTAGCTCTCTTCGTTACCGCAACGAAGCTCGCCGGAGCAATTGTCACGATCACCGTCGCTGCTAATGCCTTCTCATTCTCCCGTTTCAAGCGAAAGAATCTCCGCCCATTCCGCTCGCCTATTGACGAGTCCTCTGATGTACTCGCTGACTTCAATGTTGATGAAGAGGAAAATGGTTTTTTCTTTGGCCTGGCTACTGCACCAGCACATGTTGAGGATAGGCTTGATGATGCTTGGATTCAGTTTGCAGAGGAACAAAAGCCTGACGGTGACTCACAACAGGTCAAACAGCAAGCTGATGCTTTGATGGGCTCTGCTACTGGTGATGGTGGGTCTCACCAAGCTGCTTCATCTCGACAACATGATTCTACTGTCAAAAAGAGGAAAAAGCCTTTAAAGGTTGCTATGGAGGCCATGATTAGAGGATTTGAGAAGTACTCAGAAGAAGATGAAGAAGAAGCACCAGCTGCTGTGCCAAAAGAAGAACAGCAACACAATGTAACTGCTTGGCATAATGTTCCACACCCGGAGGAGAGATTAAGGTTTTGGTCTGATCCTGATACAGAACTGAAGTTGGCCAAAGATACTGGTGTTACTGTCTTTCGCATGGGTATAGATTGGTCAAGAGTAATGCCAACGGAGCCTGTAAATGGGCTAACAGAATCTGTTAATTATGCTGCTCTGGAGCGTTACAAATGGATTATCAATAGGGTTCGGTCGTATGGAATGAAGGTCATGCTTACTCTTTTTCATCACTCACTTCCACCCTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACTGTTGATTATTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTATCTGATCTGGTAGAATATTGGGTTACTTTTAATGAACCTCATGTCTTCTGTATGCTTACTTATTGTGCTGGAGCTTGGCCTGGTGGTAATCCTGATATGCTGGAGGTTGCTACTTCTGCTCTTCCAACTGGAGTTTTCCAACAGGCCATGCATTGGATGGCCATTGCACACTCAAAAGCATATGATTATATCCGTGGACAAAGTGATTCATTAAAACCCATAGTTGGTGTAGCTCACCATGTGTCATTCATGCGACCCTATGGTCTGTTTGATGTTGCTGCTGTTTCACTGGCTAATTCCTTGACTATCTTCCCGTACGTTGATAGTATTTCTGACAAGCTGGATTTTATAGGCATAAACTACTATGGGCAGGAAGTTGTTTCTGGTGCGGGACTGAAACTTGTGGAAACAGATGAGTACAGTGAATCTGGTCGTGGGGTATATCCTGATGGCCTGTATCGCATGTTGCTTCAGTTCCATGAAAGATACAAACATCTAAATGTTCCCTTCATCATTACTGAAAACGGAGTATCAGATGAAACAGATATAATCCGACGGCCATATCTGTTGGAACATTTGCTTGCTGTATATGCAGCCATGATAATGGGTGTTCCTGTGCTTGGTTACCTGTTTTGGACTACTTCTGACAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTAGCAGTTGACCGAGCTAATAATCTTGCACGCAACCCCCGCCCTTCGTACCATTTATTTTCTAAAATTGTGAACACGGGTAAAGTCACACGTGAAGATCGCGACAGAGAATGGAATGAACTACAGAGAGCTGCCAATGAGAAGAAAACAAGACCATTTTATCGGGCTGTAGACAAGCACGGTTTGATGTATGCAGGTGGACTCGATGAACCTATTCAGCGACCTTATATTGAGAGAGATTGGCGGTTTGGTCACTATGAGATGGATGGTCTACAGGATCCTTTGAGCCGCTTCTCAAGATTCATTATCCGGCCATGCTCCCTGAAAAGGAAAAGGAAACCTCAGAAGAGGAGTGACACATTGGTTCTTCAGCCTCTTGAAGCCACATGA 1941 0.4477 MTFVALFVTATKLAGAIVTITVAANAFSFSRFKRKNLRPFRSPIDESSDVLADFNVDEEENGFFFGLATAPAHVEDRLDDAWIQFAEEQKPDGDSQQVKQQADALMGSATGDGGSHQAASSRQHDSTVKKRKKPLKVAMEAMIRGFEKYSEEDEEEAPAAVPKEEQQHNVTAWHNVPHPEERLRFWSDPDTELKLAKDTGVTVFRMGIDWSRVMPTEPVNGLTESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVNSVSDLVEYWVTFNEPHVFCMLTYCAGAWPGGNPDMLEVATSALPTGVFQQAMHWMAIAHSKAYDYIRGQSDSLKPIVGVAHHVSFMRPYGLFDVAAVSLANSLTIFPYVDSISDKLDFIGINYYGQEVVSGAGLKLVETDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIITENGVSDETDIIRRPYLLEHLLAVYAAMIMGVPVLGYLFWTTSDNWEWADGYGPKFGLVAVDRANNLARNPRPSYHLFSKIVNTGKVTREDRDREWNELQRAANEKKTRPFYRAVDKHGLMYAGGLDEPIQRPYIERDWRFGHYEMDGLQDPLSRFSRFIIRPCSLKRKRKPQKRSDTLVLQPLEAT 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01780 646 MobiDBLite consensus disorder prediction 89 134 - -
Accr8g01780 646 MobiDBLite consensus disorder prediction 149 168 - -
Accr8g01780 646 SUPERFAMILY (Trans)glycosidases 164 549 IPR017853 -
Accr8g01780 646 ProSitePatterns Glycosyl hydrolases family 1 active site. 457 465 IPR018120 -
Accr8g01780 646 Gene3D Glycosidases 145 554 - -
Accr8g01780 646 PRINTS Glycosyl hydrolase family 1 signature 400 414 IPR001360 GO:0004553|GO:0005975
Accr8g01780 646 PRINTS Glycosyl hydrolase family 1 signature 514 526 IPR001360 GO:0004553|GO:0005975
Accr8g01780 646 PRINTS Glycosyl hydrolase family 1 signature 469 480 IPR001360 GO:0004553|GO:0005975
Accr8g01780 646 PRINTS Glycosyl hydrolase family 1 signature 490 507 IPR001360 GO:0004553|GO:0005975
Accr8g01780 646 PRINTS Glycosyl hydrolase family 1 signature 457 465 IPR001360 GO:0004553|GO:0005975
Accr8g01780 646 PANTHER GLYCOSYL HYDROLASE 133 390 IPR001360 GO:0004553|GO:0005975
Accr8g01780 646 Pfam Glycosyl hydrolase family 1 395 543 IPR001360 GO:0004553|GO:0005975
Accr8g01780 646 Pfam Glycosyl hydrolase family 1 190 375 IPR001360 GO:0004553|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01780 6 646 Glycoside Hydrolase AT3G06510 61.968 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01780 K21362 - qsa:O6P43_021895 1091.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01780 8 40105891 40111831 Accr8g01780 8 40105891 40111831 ECH