Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01753 ATGTGTCCTTCCGGCCGTTCCCTCTCTCCTCCCTCCGCCTCCTCCTCTTCTGCTGCTGGATCCGCCGTCGACTCGTCTTTCCGACCGGCATTCGATGTCCTTGACTGTGACCGCGACGGCAAGATTAGCCGCGACGATCTTCGGGCATTCTACGCCGGCAGGAATGCCGCCGACGTCGACGACGACCTCATTGGGACGATGATGGTGGTGGCGGACACCAACAAGGACGGTTTCGTGGAGTACGATGAGTTCGAGAGGGTGGTTCTGGGCGGCGGAGGCAAGAAGAACGGATCTATGAGTTCGGCGACGTCATTTTTGAAGGAGATGTTCAAAGTGATGGACAAGGACGGAGACGGCCAGCTCAGCCACCGGGATTTGAAGAGCTTCATGGAAATGGCTGGTCTAGTCATTCCCGACGAGGAAATCGATGCAATGATCATTTTGGCCGGTGGCGATCAAAACGGCGGCGTCACATTCGAAGGCTTGCATGGCATATTAATGCAACGTTAA 510 0.5608 MCPSGRSLSPPSASSSSAAGSAVDSSFRPAFDVLDCDRDGKISRDDLRAFYAGRNAADVDDDLIGTMMVVADTNKDGFVEYDEFERVVLGGGGKKNGSMSSATSFLKEMFKVMDKDGDGQLSHRDLKSFMEMAGLVIPDEEIDAMIILAGGDQNGGVTFEGLHGILMQR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01753 169 ProSiteProfiles EF-hand calcium-binding domain profile. 101 136 IPR002048 GO:0005509
Accr8g01753 169 PANTHER CALCIUM BINDING PROTEIN 26 87 - -
Accr8g01753 169 Pfam EF hand 106 132 IPR002048 GO:0005509
Accr8g01753 169 Gene3D - 12 89 - -
Accr8g01753 169 SUPERFAMILY EF-hand 24 167 IPR011992 -
Accr8g01753 169 ProSitePatterns EF-hand calcium-binding domain. 35 47 IPR018247 -
Accr8g01753 169 FunFam Calcium-binding protein CP1 19 88 - -
Accr8g01753 169 CDD EFh 106 160 IPR002048 GO:0005509
Accr8g01753 169 CDD EFh 27 84 IPR002048 GO:0005509
Accr8g01753 169 ProSitePatterns EF-hand calcium-binding domain. 114 126 IPR018247 -
Accr8g01753 169 Gene3D - 92 169 - -
Accr8g01753 169 ProSiteProfiles EF-hand calcium-binding domain profile. 30 57 IPR002048 GO:0005509
Accr8g01753 169 Pfam EF-hand domain pair 27 87 IPR002048 GO:0005509
Accr8g01753 169 ProSitePatterns EF-hand calcium-binding domain. 72 84 IPR018247 -
Accr8g01753 169 ProSiteProfiles EF-hand calcium-binding domain profile. 59 94 IPR002048 GO:0005509
Accr8g01753 169 MobiDBLite consensus disorder prediction 1 23 - -
Accr8g01753 169 SMART efh_1 141 169 IPR002048 GO:0005509
Accr8g01753 169 SMART efh_1 26 54 IPR002048 GO:0005509
Accr8g01753 169 SMART efh_1 63 91 IPR002048 GO:0005509
Accr8g01753 169 SMART efh_1 105 133 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01753 Accr-Chr8 39816704 39817213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01753 1 166 EF-hand Containing Proteins AT5G49480 52.096 3.10e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01753 K02183 - cit:102615552 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01753 8 39816704 39817213 Accr8g01753 8 39816704 39817213 ECH