Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01670 ATGAGAGTTTTCACTTACCACAACGACGAAACAACCTCAACTGTGCCCCCTTCAAAACTTTACAAAGCTCTAGTCTTAGATTCCCAAGAGCTCATCCCAAAGGTTTTGGACTCAGTTCAGTCCGTTGAAATTGTCGAAGGCAATGGAGGACCAGGCACTGTGAAAAAGCTAACTTTCGTTGAAGGTGGGGAAACAAAGTATGTGTTGCAGAAAGTGGAAGAAATTGATGAAGCAAACTATGGATATAAATACAGCATAATTGGAGGGAGTGGAATACCTGAGACAGTGGAGAAGATAACATCTGAGTGGAAATTAGAGGAAGGACCTAATGGAGTATCCAAAGGGAAGGTCGCTATCACTTACTTCACCAAAACGGATGCTCCTCCAAGTGAAGAGGAGATCAATACAGGACGAGCCAGAGTACAAGGCTTCTTCAGGGCTATTGAGGCTTACGTTTTGGCCAATCCTTAA 471 0.4352 MRVFTYHNDETTSTVPPSKLYKALVLDSQELIPKVLDSVQSVEIVEGNGGPGTVKKLTFVEGGETKYVLQKVEEIDEANYGYKYSIIGGSGIPETVEKITSEWKLEEGPNGVSKGKVAITYFTKTDAPPSEEEINTGRARVQGFFRAIEAYVLANP 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01670 156 Pfam Pathogenesis-related protein Bet v 1 family 8 155 IPR000916 GO:0006952
Accr8g01670 156 FunFam Major pollen allergen Bet v 1-A 1 156 - -
Accr8g01670 156 PANTHER - 1 156 - -
Accr8g01670 156 Gene3D - 3 156 IPR023393 -
Accr8g01670 156 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Accr8g01670 156 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Accr8g01670 156 PRINTS Major pollen allergen Bet V1 signature 4 24 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Accr8g01670 156 PRINTS Major pollen allergen Bet V1 signature 27 37 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Accr8g01670 156 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Accr8g01670 156 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Accr8g01670 156 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Accr8g01670 156 SUPERFAMILY Bet v1-like 9 156 - -
Accr8g01670 156 CDD Bet_v1-like 7 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01670 Accr-Chr8 38840702 38841262 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01670 - - mtr:11416844 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01670 8 38840702 38841262 Accr8g01670 8 38840702 38841262 ECH