Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00856 ATGGTGTTGGGAAGGTCAGGTTCAGGGATTAGAAAGCAGGTGTTTCCAGTCGATTACGAAACAGAGGTTTCACAACGGCTCATCGATGCTGCTCATAACGGCGACACCGAGGGTGCCTTGGAATGTATCGCCAATCCATTCGTCGACGTCAACTTCATCGGAACGGTGAGCCTCAAGTGTAGAACGACGGAGATTGCGTTGCACAACGAGTCACCTCACGAAGTCCGATTCGGATACGAGGAGTTCAAGACAGAGGTCACTGCTCTTTTTATTGCTGCTCATACAGGGAATTTGATCCTACTCAGAAAGCTCCTGAATGTTGGAGGTAATGTGAATGAGAGATTGTTCCGGGGCCATGCTACGACGGCAGCTGTGAGGGAAGGCCACCGTGAAGTTGTGGAGTTGCTGGTAAACGCCGGAGCATCTCAGGCGGCGTGCGAGGAGGCTCTCATGGAAGCAAGCCTTATGGATCGGCCCGCATTTGCAGAGATACTGATGGAGTCCAACATGATACGTTCTCATGTTGCAGTTCATGCTCTTGTCTCTGCCTCTTGCAGAGGATTCACACAGCTTGTTCATGTCCTCCTAAAGCATGGGGTGGATGGCAATGCCATCGATAGGACATTGCTTCAATCTTCAAAGCCATTTCTGCACGCAAATGTTCATTGCAATGCATTGTTCGCTGCTGTTGTTAGCAGGCATATTGATGTTGTGAGATTGCTCTTGCAGGCAGGTGTAAGGACAGATATTGAAGCCAAACTAGGGGCTTGGACGTGGGAAATTGATACCGGAGAAGAATTTCGTGTCGGTGCAGGATTGGCTGATGCATACCCTATCACTTGGTGTGCTGTGGAGTACTTTGAATCAAGTGGAACTATTTTAACTACGCTGCTCCACTACCTCTCACCCAACATTTTACACTTTGGAAGGTCTCTTCTCCACCATGCGATTCTCTGTAACAATGAAAAAGCTGTTAATGTGATCCTAAATTCTACTGCAAAAACAGAATTGGCAGCTCAAGCAAATTTCTATCCTATTCACTTGGCTGCGCGGCTCGGATTGAGCAATATTCTTCAATCCCTATGCGACGCTGGTTGTAATTTGGACTCACAAACACAATATGGTGACACTGCATTAATGATCTCTACAAGGTATAAGCATGAGGATTGTCTTAAAGTGTTGGTGTCAGCTGGAGCTGACTTGGGGCTTGTAAATTCATCAGGAGAATCTGTGATATCAAATGCAGAGTCTGTCAACTGGACTAACATCTTCCAGAAGGAGATCTTGAACTTGATTCGAGGCGGGAAGGTTGTTAAATCGAGCAACACCTCTGTGTTTTCTGCTTTAATTCTTGCGACTCGTGCTGATGATGTTGATGCTTTGAAGGAGCTCATTGGACGTGATAACATAAATTTGGATGAGCAAGATGAAAATGGATTCTCAGCTACCATGGTAGCTGTAGCAGAAGGTAAAGCAGAGGCTTTTAGGTTGCTTCTTAAAGCCGAAGCTGATGTCCTAAAGCTAAGAAATAAGAATAATTTGACAGCCCTTGACCTTATAAACCTAAACAAACCTGGCAACATTTTCGCGAACATTATGCTAGAATCCGCACTTGAGAAAGGATCTAATGTCTCCAATCTTGCACTACATCCTCTGCATCATGCTGCTCACCTTGGGGATACAAATCTGGTTCATAAATTACTCAAAAGAGGATTTGATGTCAACGTTTTCGACCACAATGGGCACACCCCATTAATGTTAGCAGCAAGAGAAGGCCAAAGTGAAATGTGTAAGCTTCTAATCTCATTTGGTGCCAAATGTGATATTGAGAATGAGAGACAAGAGACGGCTCTTTCACTTGCGAGAAAAAATGGCATAGGAAATGATGTAGAGCGAGTGATATCGAACGAGCTAGCTCGAAGACTAGTTGTACGCGGGGATCGTGTGAAGAAGCACACAAAGTGTGGGAAAGGGTCGCCACATGGTAAAGAACTAAGAATGGTGGAGGCAAGTGGAACGCTAAGATGGGGAAAATCAAGCAGAAGAAATGTGGTGTGTAAATCTGCTGAGATTGGTGCAAGTGATAAATTCAGACAGAACCGTAGGAGGCAATATGACGTTGAAGAGCCAGGATTGTTCCATGTGGTCACTACCAAAAAAAAAGAGTTTCATTTTGTGTGTAGTGGTGATGTTGAAATGGCTCAATTGTGGGTAACCGGTATTAAGTTGGTTACTACAGAAGCCATCTTTGGCAGATCCATGCCTGAAGCTTTGGTGACTAAATATAAGAGATATTGA 2298 0.4482 MVLGRSGSGIRKQVFPVDYETEVSQRLIDAAHNGDTEGALECIANPFVDVNFIGTVSLKCRTTEIALHNESPHEVRFGYEEFKTEVTALFIAAHTGNLILLRKLLNVGGNVNERLFRGHATTAAVREGHREVVELLVNAGASQAACEEALMEASLMDRPAFAEILMESNMIRSHVAVHALVSASCRGFTQLVHVLLKHGVDGNAIDRTLLQSSKPFLHANVHCNALFAAVVSRHIDVVRLLLQAGVRTDIEAKLGAWTWEIDTGEEFRVGAGLADAYPITWCAVEYFESSGTILTTLLHYLSPNILHFGRSLLHHAILCNNEKAVNVILNSTAKTELAAQANFYPIHLAARLGLSNILQSLCDAGCNLDSQTQYGDTALMISTRYKHEDCLKVLVSAGADLGLVNSSGESVISNAESVNWTNIFQKEILNLIRGGKVVKSSNTSVFSALILATRADDVDALKELIGRDNINLDEQDENGFSATMVAVAEGKAEAFRLLLKAEADVLKLRNKNNLTALDLINLNKPGNIFANIMLESALEKGSNVSNLALHPLHHAAHLGDTNLVHKLLKRGFDVNVFDHNGHTPLMLAAREGQSEMCKLLISFGAKCDIENERQETALSLARKNGIGNDVERVISNELARRLVVRGDRVKKHTKCGKGSPHGKELRMVEASGTLRWGKSSRRNVVCKSAEIGASDKFRQNRRRQYDVEEPGLFHVVTTKKKEFHFVCSGDVEMAQLWVTGIKLVTTEAIFGRSMPEALVTKYKRY 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00856 765 SUPERFAMILY Ankyrin repeat 309 636 IPR036770 -
Accr8g00856 765 ProSiteProfiles Ankyrin repeat profile. 341 373 IPR002110 GO:0005515
Accr8g00856 765 Gene3D - 428 524 IPR036770 -
Accr8g00856 765 ProSiteProfiles Ankyrin repeat profile. 580 612 IPR002110 GO:0005515
Accr8g00856 765 ProSiteProfiles Ankyrin repeat profile. 374 406 IPR002110 GO:0005515
Accr8g00856 765 ProSiteProfiles Ankyrin repeat region circular profile. 374 405 - -
Accr8g00856 765 SMART ANK_2a 84 113 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 308 337 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 221 252 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 374 403 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 444 472 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 547 576 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 580 609 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 175 204 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 116 145 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 478 507 IPR002110 GO:0005515
Accr8g00856 765 SMART ANK_2a 341 370 IPR002110 GO:0005515
Accr8g00856 765 ProSiteProfiles Ankyrin repeat region circular profile. 580 612 - -
Accr8g00856 765 PANTHER ANKYRIN REPEAT-CONTAINING 21 740 - -
Accr8g00856 765 ProSiteProfiles Ankyrin repeat region circular profile. 547 578 - -
Accr8g00856 765 SUPERFAMILY Ankyrin repeat 27 255 IPR036770 -
Accr8g00856 765 Gene3D - 525 633 IPR036770 -
Accr8g00856 765 ProSiteProfiles Ankyrin repeat profile. 547 579 IPR002110 GO:0005515
Accr8g00856 765 Pfam Ankyrin repeats (3 copies) 552 632 IPR002110 GO:0005515
Accr8g00856 765 Pfam Ankyrin repeats (3 copies) 313 403 IPR002110 GO:0005515
Accr8g00856 765 Gene3D - 167 263 IPR036770 -
Accr8g00856 765 Gene3D - 16 166 IPR036770 -
Accr8g00856 765 Gene3D - 304 427 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00856 Accr-Chr8 19463449 19468271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00856 442 628 Miscellaneous Gene Families AT1G07710 28.700 1.53e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00856 - - gmx:100795638 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00856 8 19463449 19468271 Accr8g00856 8 19463449 19468271 ECH