Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00844 ATGCCTCCCTCGTATTTTCCGCTTCGTTGGGAGAGCACCGGAGATCAATGGTGGTACGCGTCGCCGATTGATTGGGCGGCGGCGAACGGTCTCTACGATCTGGTAGCGGAGCTTCTCCACCTGGACACCAATTTGCTCATTAAGCTCACCTCGCTTCGTAGAATTCGCCGCCTCGAAACCGTTTGGGACGACGAATCTCAATTCGACGACGTCGCTAAATGTCGGTGTCACGTCGCGAGGAATCTTCTTCGTGAATGCGAAACGGAGAAGGGGCATAACTCTCTTATTCGTGCCGGCTACGGAGGATGGCTGCTTTACACCGCGGCATCCGCCGGAGATGTGGATTTTGTTCAGGAATTGTTAAGGAGAGACCCATTTCTGGTGTTCGGAGAAGGAGAGTACGGAGTCACTGATATACTGTATGCTGCTGCTAGAAGCAAGAACTGTGAGGTCTTCAGGATTCTTCTTGATTCTGCACGTTCGCCTAGAGATTGCAGCGTCACTGAGGCAGAATTGGATGAAAGTGGTAGGATTTACAAGAGGGACATGATGAATAGGGCAATTCATGCGGCGGCGAGAGGAGGGAATTGGGAGGTGTTGAAGCAGCTTCTTGGTAGTGGTTCTGACATTTTAGCTCTTAGAGATGCGCAAGGATCCACAGTTTTGCACGCAGCAGCTGGCAGAGGGCAAGTTGAGGTGGTGAGAAATCTACTAGAATCATCAGAGATTATCACCTCAACTGATGCACAAGGGAACACAGCCTTACATGTGGCTTCTTACAGGGGTTACTTGCCCGTAGTAGAGATCTTGATCCTTGCCTCTCCCGAATCAGCAAAGCTAACCAATAGCTATGGAGACACCTTTCTTCACATGGCAGTGGCTGGTTTTAGAAGCCCAGGTTTCCAAAGACTGGACAAGCACACTGAGCTAATGAAGCAAGTTGTTAGTGGGAAGACTGTGAACATACAGGACATCGTTAATGTCAGGAACAATGAAGGAAGAACAGTTCTTCATATAGCTGTCATTGATAACATCCAATGTGATGTGGTGGAAATGTTAATGTCCATCCCGTCCATCGATTTGAACATCCGTGACGCCGATGGGATGACTCCACTCGATCATCTGAAGCGAAGGCCTCAATCAGCTTCGTCCGAGATTTTGATCAAGCAGTTTATTTCAGCTGGAGGAATATCTAACTACCCTGATTATTTGGCCAGAAATGTCCTTCGTTCCCATCTGAAATCCCACGGCATTGGAAGGAGTCCTGGAACTTCTTTTAGAATCCCAGACGCAGAGATATTTCTTTACACTGGCGTTGATAATGCATCATCAGAAATCAACTATGATGAAGCAAGTGTAATAAAATCTAATTCTTACTCAGGTGAACTCAGCATTTGTGACTCAGCCAGCTCCCCCCCATATAGCAAGTCTGGTTCTGTTAAGTTCGCTACGAGGCGCTTAAAGTTTTTTCTGAGGTGGCCTAAAAAGAAAGATAGAGAAAACGGCGTCAGTGCCTTAAAGCTGGAAGATGAAGATAATCTTTCATCATATTCTTTTAGTTCAAGGAAAAACTTGGAAAACAATATCCCAATCCCATTACGGCAAAGATACTCAAATTTCTGTTCTCTTCCAAACGACAAAAGAACGCTATCTATTAGGACTTATCTCCCTAGTCCATCCACCAAAGAGAAATTCACTGCAGGCCTAACACAAGGTGTAATTCAGGTAAATCCAAATCTGGCACTTACTGGTCCTTTTCTCAAACCATCATCTATGGCTTCACTTACTTCCATTGATATGCCAAGAGACGTTAATATCATGGGACCCTCTGGCTCTAACCGATTGGTTGATGAAGGCACACTACAACCCAACCATAGACAGGGTTCGTTCGGAAAGAGATTGATGAATAGTTATCTATCTTTTGGAGCAGCACAGGGTCTGGGTATGGAAGATTCAAATCGTTTCAGTTCTTTAGTTGCGTAA 1983 0.4579 MPPSYFPLRWESTGDQWWYASPIDWAAANGLYDLVAELLHLDTNLLIKLTSLRRIRRLETVWDDESQFDDVAKCRCHVARNLLRECETEKGHNSLIRAGYGGWLLYTAASAGDVDFVQELLRRDPFLVFGEGEYGVTDILYAAARSKNCEVFRILLDSARSPRDCSVTEAELDESGRIYKRDMMNRAIHAAARGGNWEVLKQLLGSGSDILALRDAQGSTVLHAAAGRGQVEVVRNLLESSEIITSTDAQGNTALHVASYRGYLPVVEILILASPESAKLTNSYGDTFLHMAVAGFRSPGFQRLDKHTELMKQVVSGKTVNIQDIVNVRNNEGRTVLHIAVIDNIQCDVVEMLMSIPSIDLNIRDADGMTPLDHLKRRPQSASSEILIKQFISAGGISNYPDYLARNVLRSHLKSHGIGRSPGTSFRIPDAEIFLYTGVDNASSEINYDEASVIKSNSYSGELSICDSASSPPYSKSGSVKFATRRLKFFLRWPKKKDRENGVSALKLEDEDNLSSYSFSSRKNLENNIPIPLRQRYSNFCSLPNDKRTLSIRTYLPSPSTKEKFTAGLTQGVIQVNPNLALTGPFLKPSSMASLTSIDMPRDVNIMGPSGSNRLVDEGTLQPNHRQGSFGKRLMNSYLSFGAAQGLGMEDSNRFSSLVA 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00844 660 ProSiteProfiles Ankyrin repeat region circular profile. 250 271 - -
Accr8g00844 660 ProSiteProfiles Ankyrin repeat region circular profile. 217 239 - -
Accr8g00844 660 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 4 399 - -
Accr8g00844 660 ProSiteProfiles Ankyrin repeat profile. 183 215 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 18 47 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 100 129 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 134 164 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 367 400 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 183 212 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 332 363 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 250 279 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 217 246 IPR002110 GO:0005515
Accr8g00844 660 SMART ANK_2a 284 324 IPR002110 GO:0005515
Accr8g00844 660 SUPERFAMILY Ankyrin repeat 105 389 IPR036770 -
Accr8g00844 660 ProSiteProfiles Ankyrin repeat profile. 217 249 IPR002110 GO:0005515
Accr8g00844 660 ProSiteProfiles Ankyrin repeat profile. 250 271 IPR002110 GO:0005515
Accr8g00844 660 Pfam Ankyrin repeats (3 copies) 188 271 IPR002110 GO:0005515
Accr8g00844 660 Gene3D - 12 399 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00844 Accr-Chr8 18965683 18968807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00844 105 373 Miscellaneous Gene Families AT2G31820 32.601 1.78e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00844 - - gmx:100791999 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00844 8 18965683 18968807 Accr8g00844 8 18965683 18968807 ECH