Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00830 ATGGATATGATGCCGTACCAGCTTTACCGATTACCTTACCAGGACTCCCTCAAAGTGCTGGAGGCTGATATTCAACATGCCAATGCTTTGGCTGCTGCGATTCCCAGAGTCAAGGGTGGGACTGTACTTCAAATGAAATTGGTATACAATGACTGGGCTCCAATCTTTCTCTTCTTGCTACAGTGGATGGATTGCTCTTGCACTTGCCTTTTTCAGGGATATCTGAGCTTCTTTCATGTGCTTATCTATAAGGTTCACAAAGAGGGAAGATCAAGCGTATCTGCTCATGGAAGGAAGGCAACCATAAAGGACTTTTATGCCGTTATATTGCCGTCTCTCCAGCGGCTTCATGGGAGCTTGGACAAGTTGGAAATTCCAAAGGAAGGTTATTCTAGTAGCATAGAAGGTCCGTGTTCTAAGAAGAAGATGATCGAAGCAGATGGGAGACTAAGCAGTGTGGATCTTGAGAGAGAAGATGAATGTGGAATCTGTTTGGAACCTTGCACCAGAATGGTTCTGCCTAATTGCTGCCACGCCATGTGTATCAAATGCTATCGCAAATGGAACAGAAAGTCAGAGTCTTGCCCTTTCTGTCGTGGTAGCTTGAGGAGAGTTAATTCAGAGGACTTATGGGTGCTAACTTGTAACGAGGATGTTGTGGATGCCGAGACGGTGTCCAAGGAGGACTTGTTGCGATTCTATCTCTACGTCAGTAGCTTGCCTAAAGATTATCCGGATGCACTCTTCTTGATGTATTATGAATACTTGATTTGA 774 0.447 MDMMPYQLYRLPYQDSLKVLEADIQHANALAAAIPRVKGGTVLQMKLVYNDWAPIFLFLLQWMDCSCTCLFQGYLSFFHVLIYKVHKEGRSSVSAHGRKATIKDFYAVILPSLQRLHGSLDKLEIPKEGYSSSIEGPCSKKKMIEADGRLSSVDLEREDECGICLEPCTRMVLPNCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFYLYVSSLPKDYPDALFLMYYEYLI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00830 257 ProSiteProfiles Zinc finger RING-type profile. 161 199 IPR001841 -
Accr8g00830 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 210 IPR013083 -
Accr8g00830 257 PANTHER RING FINGER PROTEIN 41, 151 12 255 - -
Accr8g00830 257 SUPERFAMILY RING/U-box 152 203 - -
Accr8g00830 257 FunFam RING/U-box superfamily protein 142 208 - -
Accr8g00830 257 Pfam Ring finger domain 159 199 IPR001841 -
Accr8g00830 257 ProSitePatterns Zinc finger RING-type signature. 176 185 IPR017907 -
Accr8g00830 257 SMART ring_2 161 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00830 Accr-Chr8 16699556 16702111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00830 - - vum:124847610 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00830 8 16699556 16702111 Accr8g00830 8 16699556 16702111 ECH