Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00808 ATGGGGACGACGCCTCCCTTCTTCTTTTTAAGCTTTTTGGCTCTGCTCTGTTTCTCTACCGTTCTGCTCCTAACGGCGTCGTCACAGCCACTGTTCACGAATTCGCGGTGGATCGTGACGGAAGACGGCGAGCGAGTGAAGCTCGCGTGTGTGAATTGGGTTTCGCATCTGGAACCCTTACTTGCAGAAGGTCTGAGCAAGCAGCCTGTGGATGTGATCTCCAAACAGATTAAGTCGATGGGATTCAACTGCGTGAGATTCACTTGGCCAATCCTTCTCGTAACCGACGACTCTCTCGCCTCCCTCACCGTCCGGCAGTCTTTCCTCAACCTTGGGCTCCTCGAATCCATCGCCGGCATCCAATCCAATAACCCTTCCATCATCGATCTTCCCCTTATCCAAGCTTACCAGTGGGTGGTGGAGAAGATGGGGAAGGAGGAAGTGATGGTGATATTGGACAACCACATGACGAAGCCGGGGTGGTGCTGCAGTAACTCTGACGGCAATGGATTCTTCGGCGACCGGGATTTCGACCCGGAGCTGTGGGTGGAGGGGCTCACGAAGATGGCTTCGCTGTTCAATGGAGTGAGCCATGTGGTGGGGATGAGCCTGAGAAATGAACTGCGAGGCCCCAAACAAAACGTCAATGACTGGTATAGGTACATGACAAAAGGAGCAGAAGCCGTGCATGCAGCCAACAAGGACGTTCTTGTGATTCTCTCTGGCCTAAATTTCGACAAAGACTTATCCTTCCTCCAGAACCGATCCGTTAAGCTAACGTTCGAGAGGAAACTAGTATTCGAAGTTCACTGGTACGCCTTCACGGACGGTCAGGCATGGCTTCACGGCAACCCAAACCAAGTGTGTGGCCAAGTTTCAAGGAACGTGATGAGACAGGCGGGTTATTTGGTGGAACGAGGTTGGCCATTGTTTGTGAGCGAGTTTGGTGTGGACTTAAGAGGCACCAACGAGAACGATAACAGGTACTTGAGTTGTTTCCTGGGTTTGGCTGCTGAATATGACTTGGATTGGGCATTATGGACACTAGTTGGAAGCTATTACCTTAGGCAAGGTGTCGTTGGAATGAATGAGTATTATGGACTTTTAAACTGGGATTGGTGTGATGTCAGAAATTATTCTTTCTTACAAAGGATCTCTTCTCTCCAATCTCCTTTTCGAGGGCCAGGGATATCAGAAGGCAGGCCATATAAAGTAATATTCCATCCATTAACAGGTCTCTGCGTGCAAAGAAAATCACTGCTTGACCCATTGACATTAGGATCCTGCTCTCAAGCTGAAGGCTGGAACCACACACCCCAGAAGATACTCACAGTGAAGGGAACATATTTCTGTTTACAAGCAAACGATTTAGGGATGCCAGCAAAACTAGGAGTAATATGTTCAGGGCCTAATTCCAAATGGGATATAATATCAGAATCTAAGATGCATCTTTCATCAAAACTCACAGATGGTTCTTCTGTTTGTCTCGATGTGGATTCCAACAACAACCTCGTTACCAACACATGCAAATGCTTGAACAGAGATCCTTCCTGTGATCCTTCTAGCCAATGGTTCAAACTAGTCAACACCACACGAACTTCAGTCTCTACTCAGTCATTGTCGTTACCTATCGACTCAAATTTACCAGGAACAATTTCTCACTGGGAATCAGTAAGCTCAATATAA 1686 0.4775 MGTTPPFFFLSFLALLCFSTVLLLTASSQPLFTNSRWIVTEDGERVKLACVNWVSHLEPLLAEGLSKQPVDVISKQIKSMGFNCVRFTWPILLVTDDSLASLTVRQSFLNLGLLESIAGIQSNNPSIIDLPLIQAYQWVVEKMGKEEVMVILDNHMTKPGWCCSNSDGNGFFGDRDFDPELWVEGLTKMASLFNGVSHVVGMSLRNELRGPKQNVNDWYRYMTKGAEAVHAANKDVLVILSGLNFDKDLSFLQNRSVKLTFERKLVFEVHWYAFTDGQAWLHGNPNQVCGQVSRNVMRQAGYLVERGWPLFVSEFGVDLRGTNENDNRYLSCFLGLAAEYDLDWALWTLVGSYYLRQGVVGMNEYYGLLNWDWCDVRNYSFLQRISSLQSPFRGPGISEGRPYKVIFHPLTGLCVQRKSLLDPLTLGSCSQAEGWNHTPQKILTVKGTYFCLQANDLGMPAKLGVICSGPNSKWDIISESKMHLSSKLTDGSSVCLDVDSNNNLVTNTCKCLNRDPSCDPSSQWFKLVNTTRTSVSTQSLSLPIDSNLPGTISHWESVSSI 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00808 561 Gene3D Glycosidases 27 390 - -
Accr8g00808 561 SUPERFAMILY (Trans)glycosidases 28 385 IPR017853 -
Accr8g00808 561 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 18 532 - -
Accr8g00808 561 SUPERFAMILY Ricin B-like lectins 400 527 IPR035992 -
Accr8g00808 561 Pfam Cellulase (glycosyl hydrolase family 5) 71 349 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00808 Accr-Chr8 14444690 14449715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00808 28 532 Glycoside Hydrolase AT1G13130 61.690 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00808 - - gmx:100790415 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00808 8 14444690 14449715 Accr8g00808 8 14444690 14449715 ECH