Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00776 ATGTACATAAACGAAGGGTGGTTAACTAGTAACATTGGAGTACAAGGACAAACTGAAACGGTCCGAGGAGTAAGCAGCATGGGCGGTCGAGGCAAGTCTCGCACTCAACGGAAGCATTTCCGGCAGAGCAGAGAGAATGTGTGGAAGCGTTCAAAACCTGATCCTTCTTCTCAAGATCCCGAATCCACCGACAATCCAAATTCTTCTTGGACTCCCTTCGCCACTCAGAACTCTGCTTTTGATGAGTATTACATAGAGCAGGGCATAGTTCAACCAGAAGATTGGGATGCTTTTGTTGCAGTTCTCAGATCTCCATTGCCTGCTAGCTTCAGAATTAACGCTTGTAGCCAGTTTTCTGCTGATCTTAGGTCGCAATTGGAGAATGATTTTGTGCAAACTCTTCAGGCTGAGGTTGTTGAAGGGGATGATCCAGAGGCTATTAGACCTTTGCCATGGTATCCTGAGAATCTTGCTTGGCATTCCAACTTCTCCCGTATGCAGCTGAGGAAGAATCAAACGCTAGAAAGGTTCCATGAATTCTTAAAGCTAGAAAATGAAATTGGAAATATTACAAGACAGGAAGCTGTCAGCATGGTGCCTCCACTCTTCTTGAATGTGCAGCCAGATCATTTTGTGCTTGATATGTGTGCTGCCCCAGGTTCGAAAACATTCCAATTGCTTGAGATCATACACCAATCAACTAAAGCTGGATCTCTTCCTGATGGAATGGTGATAGCAAATGATCTTGATGTTCAAAGATGTAATCTTCTCATCCATCAAACAAAAAGGATGTGCACAGCCAACCTCATCGTCACTAATCATGAAGCTCAGAACTTCCCAGGCTGTCGTTTAGTCAGAAATCATGAATCATTGGAACCAGAACAGCACATTAGCCAACTTTCATTGGATTGCATTCTCTGTGATGTCCCTTGCAGTGGAGATGGAACCCTTCGCAAGGCGCCTGATCTTTGGAGGAAATGGAATACTGGGAGGGGCAATGGGCTTCATAGCCTACAAGTTCTGATCACTATGCGAGGCTTATCTTTACTTAAAGTTGGCGGAAGAATGGTCTATTCAACCTGCTCAATGAATCCAATTGAGAATGAAGCTGTGGTTGCAGAGGTTTTACGAAGGTGTGGAGGATCTGTTGAACTTGTTGATGTCTCAAATGAGTGCCCCAAACTTCTGCGCCGGCCAGGTCTCAAGAGATGGAAGGTATGTGACAGGAGCTTGTGGTTGTCGTCCTACAAAGATGTTCCCATGAATCGAAGAAGTGCAGTTTTCCCCAGCATGTTTCCTTCTGGAAAAAATTATCAGGACCTTGTTGACAGTAATCAAAAGATGGACATGGGAGATGATACTGATAAGGGTGTTTGCGAAAATTCTGAAGATGGCAATCAAGCAACAGAGAATCCCATGACAGATAAGTTAACTGAGGAAGTTTCTGAGTTACCGCTAGAGCGTTGCATGAGGATAGTTCCTCATGATCAAAACACTGGAGCTTTCTTTATTGCAGTACTGCAAAAGGTTTCTCCTCTTCCAGCAATTCATATTCCTGAAAAAACAAAAAATGTAATTGATAAGCAGCATGGAGAACCAGAGAACCAGGATCTTGAAGATTCAAAAGTATCGCAGGTCGATTCATTAGAAAATACACATGAGGAGGCTTTGAAAGAGGTTAATGTAATTGATAACAAACCCGACAAAGAAGATTTGGAAGCTAGTCCTTCTGGTGAAGAGGGTAATGTAATTGATAACAAACCCGACAAAGAAGATTTAGAAGGGGATGCAGAGGAAGTGCAAAACCTTCCCAAAACAGATAGCATAGTAAAAACGACTTCAAGGAAAAGAAAGTTGCAGATTCAAGGCAAGTGGAGAGGTGTTGATCCTGTTTTCTTCTTCAAAGATGAAGACACTATTAACAGCATAAAAGATTTTTATGGCATCGATGAGAGTTTTCCATTTAATGGTCATCTTGTCACTAGAAACCAAGATGTAGGCCATGTGAAAAGAATTTACTATGTCAGCAAGTCAGTCAAAGATGTTCTTGAACTCAATTTCTCAGTTGGGCAGCAGCTCAAAATAGCATCCCTTGGTCTGAAGATGTTTGAAAGACAGGCATCAAGAGAAGGAAGTTCAGCACCATGTGCTTTTCGAATATCATCTGAAGGATTGCCCCTTATTTTGCCATACATTACCAAGAGGATTCTTCGCGCATCTCCTGTAGACTTCAAGCATCTTCTGCAGTACAAAACTATAAAATTTGCAGATTTTGTTGATGCCGAGTTTGGCAAAATGGCCGAAAACCTAACACTAGGCTATTGTATTATAGTTCTATGTAAAGGGAAAAGAGAAGCATCAGAATCCATTCAGGTGGATGAGTCCACCATAGCCATTGGATGCTGGAAAGGAAGGGGCAGTTTGAATGTGATGGTAACTGCAATGGACTGCCGAGAACTGCTTGAAAGACTTTTAGTGCGTTTTGATGCAGAAAATGGTTCCTCCATGCATGAGAACATGCCCTCCAATACTAATGCTGTTGATGAAGTACAGAGCACTCACGATATTGATGACTCGGAAGCTCCTGAAGGCCCTAATAGCTAA 2604 0.4247 MYINEGWLTSNIGVQGQTETVRGVSSMGGRGKSRTQRKHFRQSRENVWKRSKPDPSSQDPESTDNPNSSWTPFATQNSAFDEYYIEQGIVQPEDWDAFVAVLRSPLPASFRINACSQFSADLRSQLENDFVQTLQAEVVEGDDPEAIRPLPWYPENLAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLNVQPDHFVLDMCAAPGSKTFQLLEIIHQSTKAGSLPDGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQNFPGCRLVRNHESLEPEQHISQLSLDCILCDVPCSGDGTLRKAPDLWRKWNTGRGNGLHSLQVLITMRGLSLLKVGGRMVYSTCSMNPIENEAVVAEVLRRCGGSVELVDVSNECPKLLRRPGLKRWKVCDRSLWLSSYKDVPMNRRSAVFPSMFPSGKNYQDLVDSNQKMDMGDDTDKGVCENSEDGNQATENPMTDKLTEEVSELPLERCMRIVPHDQNTGAFFIAVLQKVSPLPAIHIPEKTKNVIDKQHGEPENQDLEDSKVSQVDSLENTHEEALKEVNVIDNKPDKEDLEASPSGEEGNVIDNKPDKEDLEGDAEEVQNLPKTDSIVKTTSRKRKLQIQGKWRGVDPVFFFKDEDTINSIKDFYGIDESFPFNGHLVTRNQDVGHVKRIYYVSKSVKDVLELNFSVGQQLKIASLGLKMFERQASREGSSAPCAFRISSEGLPLILPYITKRILRASPVDFKHLLQYKTIKFADFVDAEFGKMAENLTLGYCIIVLCKGKREASESIQVDESTIAIGCWKGRGSLNVMVTAMDCRELLERLLVRFDAENGSSMHENMPSNTNAVDEVQSTHDIDDSEAPEGPNS 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00776 867 MobiDBLite consensus disorder prediction 835 867 - -
Accr8g00776 867 MobiDBLite consensus disorder prediction 835 850 - -
Accr8g00776 867 MobiDBLite consensus disorder prediction 21 72 - -
Accr8g00776 867 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 75 417 - -
Accr8g00776 867 MobiDBLite consensus disorder prediction 58 72 - -
Accr8g00776 867 MobiDBLite consensus disorder prediction 583 597 - -
Accr8g00776 867 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 36 840 IPR023267 GO:0001510
Accr8g00776 867 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 510 IPR029063 -
Accr8g00776 867 Pfam 16S rRNA methyltransferase RsmB/F 203 387 IPR001678 GO:0008168
Accr8g00776 867 Coils Coil 546 566 - -
Accr8g00776 867 Gene3D Vaccinia Virus protein VP39 74 419 IPR029063 -
Accr8g00776 867 MobiDBLite consensus disorder prediction 563 597 - -
Accr8g00776 867 MobiDBLite consensus disorder prediction 40 57 - -
Accr8g00776 867 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 159 180 IPR023270 GO:0016428
Accr8g00776 867 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 693 705 IPR023270 GO:0016428
Accr8g00776 867 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 387 406 IPR023270 GO:0016428
Accr8g00776 867 MobiDBLite consensus disorder prediction 524 547 - -
Accr8g00776 867 PRINTS RNA (C5-cytosine) methyltransferase signature 353 369 IPR023267 GO:0001510
Accr8g00776 867 PRINTS RNA (C5-cytosine) methyltransferase signature 303 315 IPR023267 GO:0001510
Accr8g00776 867 PRINTS RNA (C5-cytosine) methyltransferase signature 492 509 IPR023267 GO:0001510
Accr8g00776 867 PRINTS RNA (C5-cytosine) methyltransferase signature 213 223 IPR023267 GO:0001510
Accr8g00776 867 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 98 510 IPR001678 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00776 Accr-Chr8 13398699 13407584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00776 K15334 - gmx:100808859 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00776 8 13398699 13407584 Accr8g00776 8 13398699 13407584 CCT
Accr8g00776 8 13398699 13407584 Accr8g00776 8 13398699 13407584 ECH