Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00737 ATGGCAGACACTTCGCCAGACCGGAGATCGGGTGGTTGTGGCATAATCAACGCCGTGTTTGGACGACGCCAACGAAGATCTCATTCTTCTCCTCCTTCTCCTACCTCCAGAAATGTTAATAATAATAATTTTAGCCCAGATGTCAAACCATCCTCAGACATGTTGAATCCAAAGCGCCGGCGAGCCCCATCCGACGACCACGCCGATTTACTCGCCGCTAACCCACAGACGCGTAATAATGTCATAATTCAAAACCAGCAGAGAAAACAACATCTCAACAACGAAACATCAAAACAGACACAACAGGGTCGTCATCTTCATGCATATAATAATCAATGCCGATCAAAGGTACCCAAAGAAGCCCTCGGAATCTCCGGCGAGCTAGACAGTTATATCACCGATCACCAGAAGTCCAAGGGAAGTTGTACCCTTGTTCGTGCTTCCTCCAGCAACGTCATGCTCTTTGGTGATTTAGGAAACTTACGACAAGGTGGAGGGAATAATAATAATAATTCAAATTCTTCTTACGGTGTAATAGATCACATCCTTCCTAATAAGCCTAAAGATGAAACCTTTAAGGAAAATGGTGAAGGAAGATACTCAACAACAACGACAACAATAAGGCTTGCGACAGAGAGAAACAACAACAAAGGGAACATGAAACAAGAAAGGGTTTCTTCTCTGTGCAGAGCGATATCAACAAGAATGGACCCAGAGCAGTTGAAGATAATGGGAAATGAGGATTACAAGAATGGTAGATTTGCAGAGGCATTGTCTCTGTATGATGCAGCCATAGCCATTGATCCAAACAAGGCTTCATATAGAAGTAACAGAAGTGCGGCTTTGACAGCTCTCGGTCGGCTCATCGAAGCCGTGTTCGAGTGTAGAGAAGCCATTAGAATTGATCCTCATTACCATAGAGCTCATCAACGGTTGGGAAGTTTGTATGTTAGGTTAGGGGAAACAGAGAAGGCACAGTATCATTTTAAACATGCGGGACCAGATGCAGATCCTGATGAGATTGCCAAGGTTAGGGATCTTCAAGTTCATCTTAACAAGTGTACAGAGGCTCGTAGGTTAAGGGATTGGAACACTGTAAGAAAGGAGGCCAATTGTGCTATTTTATGTGGTGCAGATTCTGCTCCTCAGATATTTGCTTTGCAAGCTGAAGCACTTCTAAAGCTTCGAAAGCATCATGATGCCGTTGAAGTGATATCAAGTGGTCCTGATTTTACAGACGAAGAGCTGAGCAAGTTTTTTGGACCTATTGGTTTCGCTAATTTGTTGGTCACTCGGGCTCAGGTTGATATGGCTGCAGGAAGATTTGATGATGCTTTGGAGGAGGCTCAACGAGCAGTGAAGTTGGACTCAAATAACAAGGAAGCAGGGGTTGTAATGAGAAGAGCTCGAGCAGTAGCAGCAGCAAGATCACATGGAAACGAGCTTTTTGGGGCATGTAGATTCTCGGAGGCATTAACAGCCTATGGAGAAGGGCTTGAGCATGATCCTAGTAACTCGGTTTTGTTGTGCAACCGAGCCGCTTGCCGGTCCAAATTGGGTCAATTTGAGAGAGCCATAGAGGATTGTACTGCTGCTCTCAATCTAAGGCCTTCATACAGCAAGGCCAGATTGAGAAGAGCAGACTGTAATGCTAAGTTGGAAAGATGGGAAGCTTCAATTGAAGACTATGAGATATTGCTGAGAGAAACACAAGAAGATGAGGAAGTAAGAAAGGCGTTAATGGAGGTTCAAAAAAAGCTCAAGAAACAACGAGGTGAAGAGTTATAG 1788 0.4424 MADTSPDRRSGGCGIINAVFGRRQRRSHSSPPSPTSRNVNNNNFSPDVKPSSDMLNPKRRRAPSDDHADLLAANPQTRNNVIIQNQQRKQHLNNETSKQTQQGRHLHAYNNQCRSKVPKEALGISGELDSYITDHQKSKGSCTLVRASSSNVMLFGDLGNLRQGGGNNNNNSNSSYGVIDHILPNKPKDETFKENGEGRYSTTTTTIRLATERNNNKGNMKQERVSSLCRAISTRMDPEQLKIMGNEDYKNGRFAEALSLYDAAIAIDPNKASYRSNRSAALTALGRLIEAVFECREAIRIDPHYHRAHQRLGSLYVRLGETEKAQYHFKHAGPDADPDEIAKVRDLQVHLNKCTEARRLRDWNTVRKEANCAILCGADSAPQIFALQAEALLKLRKHHDAVEVISSGPDFTDEELSKFFGPIGFANLLVTRAQVDMAAGRFDDALEEAQRAVKLDSNNKEAGVVMRRARAVAAARSHGNELFGACRFSEALTAYGEGLEHDPSNSVLLCNRAACRSKLGQFERAIEDCTAALNLRPSYSKARLRRADCNAKLERWEASIEDYEILLRETQEDEEVRKALMEVQKKLKKQRGEEL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00737 595 ProSiteProfiles TPR repeat profile. 426 459 IPR019734 GO:0005515
Accr8g00737 595 SMART tpr_5 472 505 IPR019734 GO:0005515
Accr8g00737 595 SMART tpr_5 540 573 IPR019734 GO:0005515
Accr8g00737 595 SMART tpr_5 506 539 IPR019734 GO:0005515
Accr8g00737 595 SMART tpr_5 238 271 IPR019734 GO:0005515
Accr8g00737 595 SMART tpr_5 272 305 IPR019734 GO:0005515
Accr8g00737 595 SMART tpr_5 426 459 IPR019734 GO:0005515
Accr8g00737 595 Gene3D Tetratricopeptide repeat domain 236 592 IPR011990 GO:0005515
Accr8g00737 595 Pfam Tetratricopeptide repeat 245 304 - -
Accr8g00737 595 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 594 IPR044534 -
Accr8g00737 595 MobiDBLite consensus disorder prediction 1 65 - -
Accr8g00737 595 Coils Coil 546 573 - -
Accr8g00737 595 MobiDBLite consensus disorder prediction 23 50 - -
Accr8g00737 595 SUPERFAMILY TPR-like 237 590 IPR011990 GO:0005515
Accr8g00737 595 Pfam Tetratricopeptide repeat 508 539 IPR001440 GO:0005515
Accr8g00737 595 ProSiteProfiles TPR repeat profile. 238 271 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00737 Accr-Chr8 12544021 12547680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00737 - - mnt:21398403 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00737 8 12544021 12547680 Accr8g00737 8 12544021 12547680 ECH