Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00712 ATGGCCCTTCAATGGCTGTTGGTCTGGGTAATGGCGTTCTTTCTTCATGGGAATGCAATGCCGATCACGTTCTCTGTGAGGCTGATTCATCGTTTCTCTGAAGAAATGAAGGCTCTTCACGTTTCCGGTGGCGGTCGTAATGTGTCTGGTGGCTGGCCGGAGAGGAGGAGTAGGGAATACTACGAGATACTTGTTGGCGGCGACTTTCTCAGGCATAAGATGAAGCTTCGAGCACCACATCAGTTGCTTTTTCCCTCTCACGGCAGCAAAACGATGTCGCTTGGAAACGACTTTGGCTGGTTACATTACACATGGATTGATATAGGGACGCCAAGTACTTCGTTCCTTGTAGCACTGGATGCTGGGAGTGATCTATTTTGGGTTCCATGTGATTGCGTACAGTGTGCTCCTCTATCTGCAAGTTACTATGCCAATCTGGATAGAGATCTGAATGAGTATAGTCCATCTCGATCAACGTCCTGCAAGAATCTATCTTGTAGCCATCAGTTATGTCAGATCGGTTCTGACTGTAAAAGTTCCAGGCAGCAGTGTTCTTACACTGTCAATTACGTCTCTGAGAATACATCAAGTTCTGGATTGTTAGTAGAGGACATATTGCATCTTGCGTCAAGTGGTGATGGTGAATCTAACTCTACAGTTCAGGCTCCAGTCATTATAGGGTGTGGTATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCTCCAGATGGTCTAATTGGTTTGGGAACTGGAGAAATTTCAGTTCCAAGCTTGCTTGCCAAATCAGGATTGATCCATAATTCTTTTTCAATGTGCTTTGACGATGATGATTCTGGTAGAATATTCTTTGGGGACCTGGGATCAGCCATCCAACAGTCTACTCCATTCCTGCCATTGGATGGAACATATTCAACATATGTTATTGGAGTGGAGGCATGTTGTATCAAGGATTCATGTCTTAAGATGACGAGCTTCAAAGCACAGGTTGATAGTGGAACATCATTTACATTTCTTCCAGGCCATGTGTATGATGCAATTACTAAGGAGTTTGACCAACAAGTGAATGCTTCAAGATCTACCTTTGAAGGATCCCCTTGGGACTATTGCTATGCTTCTAGTTCACCTGAGTTGCCCAAGGTTCCCTCCCTCACATTTACATTCCAACAGAATAGCAGCTTTGTGGTCCATAATCCTGTATTTGTATTTTATGACAGCCAGGGAGTTATTGGATTTTGTTTAGCCATACAACCAACAGATGGAGATATGGGAACAATTGGACAGAACTTCATGACTGGCTACAGGCTGGTATTTGATAGGGAAAACATGAAGATGTCCTGGTCGCAGTCACGTTGTGAGGATCTTGCTGGTAAGAGTATGCCCTTGTCTCCAAATAAGACGCCGCCAAAACCCTTGCCGACAAATGAGCAGCAGAGAACCAACGGTCATGCAGTCGCTCCAGCTGTTGCTGGAAGAGCTCCCAACAAACCATCAACTGCTTCATCTCAGATGATGTCATGCCAGCAACAACATTGGCACATTTGCTTGGTTCTTCTTCTTCAACTTGTAGTAGCATCTTTAAGGCTTTAA 1587 0.4461 MALQWLLVWVMAFFLHGNAMPITFSVRLIHRFSEEMKALHVSGGGRNVSGGWPERRSREYYEILVGGDFLRHKMKLRAPHQLLFPSHGSKTMSLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLFWVPCDCVQCAPLSASYYANLDRDLNEYSPSRSTSCKNLSCSHQLCQIGSDCKSSRQQCSYTVNYVSENTSSSGLLVEDILHLASSGDGESNSTVQAPVIIGCGMKQSGGYLDGVAPDGLIGLGTGEISVPSLLAKSGLIHNSFSMCFDDDDSGRIFFGDLGSAIQQSTPFLPLDGTYSTYVIGVEACCIKDSCLKMTSFKAQVDSGTSFTFLPGHVYDAITKEFDQQVNASRSTFEGSPWDYCYASSSPELPKVPSLTFTFQQNSSFVVHNPVFVFYDSQGVIGFCLAIQPTDGDMGTIGQNFMTGYRLVFDRENMKMSWSQSRCEDLAGKSMPLSPNKTPPKPLPTNEQQRTNGHAVAPAVAGRAPNKPSTASSQMMSCQQQHWHICLVLLLQLVVASLRL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00712 528 Gene3D Acid Proteases 288 453 IPR021109 -
Accr8g00712 528 FunFam Aspartyl protease family protein 1 88 285 - -
Accr8g00712 528 PRINTS Pepsin (A1) aspartic protease family signature 423 438 IPR001461 GO:0004190|GO:0006508
Accr8g00712 528 PRINTS Pepsin (A1) aspartic protease family signature 108 128 IPR001461 GO:0004190|GO:0006508
Accr8g00712 528 PRINTS Pepsin (A1) aspartic protease family signature 327 338 IPR001461 GO:0004190|GO:0006508
Accr8g00712 528 Pfam Xylanase inhibitor N-terminal 103 285 IPR032861 -
Accr8g00712 528 PANTHER ASPARTYL PROTEASES 39 444 IPR001461 GO:0004190|GO:0006508
Accr8g00712 528 Gene3D Acid Proteases 77 285 IPR021109 -
Accr8g00712 528 ProSiteProfiles Peptidase family A1 domain profile. 102 447 IPR033121 -
Accr8g00712 528 SUPERFAMILY Acid proteases 96 453 IPR021109 -
Accr8g00712 528 MobiDBLite consensus disorder prediction 456 481 - -
Accr8g00712 528 FunFam Aspartyl protease family protein 1 288 453 - -
Accr8g00712 528 Pfam Xylanase inhibitor C-terminal 324 447 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00712 Accr-Chr8 11811388 11816353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00712 78 454 Miscellaneous Gene Families AT1G44130 26.768 1.56e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00712 - - gmx:100782209 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00712 8 11811388 11816353 Accr8g00712 8 11811388 11816353 ECH