Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00624 ATGGCGGGACATGACACCGAACTGAAGGCGGCGACGACAGCATACCGGAATGCGAAGGCCGAGGCGAACAGGCAGGAGGAGGCACGATGGGCGAACGTGATCGGCAACATATTGAAGAATAGAGGAGAGTACGTTGAGGCCCTCAGGTGGCTTCGAAGAGACTATGAGGTTTCTCTCAAATATTTGCCCGAGAAGCATTTGCTCCCCACCTGTCAATCTCTTGGAGAAATTTATCTTCGGCTTGAGCGTTTCAGCGAGGCTCTAACGTATCAGAAAAAACACTTGGAGCTCGCTAGGGATGCTAATGACCTTGTTGAGCAGCAAAGGGCCAGCACCCAACTCGGTCGTACTTATCATGAATTATTTTCAAGATCAGAACATGATCATCTTTCAATACGAAATGCAAAAAAGTATTTTAAGTCGTCTATGGAGCTAGCACAGATTCTTAAGGAGGACCCACCAACTAATAAGTCTTCCTTTGTCAAAGAATATATTGATGCACACAACAATATTGGAATGCTGGAAATGGAACTTGATAACTTGGAAGAGGCTAAGAAAATCCTAACTAGAGGACTAGAGATTTGCAATGAAGAAGAGGTCAGCGAAGATGACGATGGGCGCAGCAGGCTCCATCATAACCTTGGAAATGTATACATGGAACTGAGAATGTGGGAAAAAGCTAGAAAACACATTGAGAAGGACATCCAAATTTGTAACAGAATTGGACATTGTCAAGGAGAAGCAAAGGGCTACATTAATCTTGGTGAAGTGCATTACAGGACTCAGAAATATGATGAAGCACGTTCTTATTACGAGAAGGCACTTACTCTAGCGAAATCCTTGGAAGACGAGGATGCGTTGGTTAGGCAAATTGATGAAAATATCAAAACTGTAAACAAAGCTGTCAAAGTAATGGATGAATTAAAGAAAGAAGAGCAGAACTTCAAAAAGCTTAAAAGATATTTGGCTGCTACAAGAGGCTCAGCACATGAGCGTAAATATCTTCTGCAGCAAAATGCTTCTGTTGATCGCCTTCTTGAGAAATCAAGTATGATCATTGCATGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAAGAAATAGCAAGTGAATTGCGTGACGATGAAAAGCTCAGTGATTCATATCTGGCTCTTGGAGAATCATATCAGAAGCTCAGAAATTTCAATGAATCTATCAAATGGTACAGAAAGAGTTTGGAATTGTACAAAACAATTGGTAACTTAGAGGGCCAAGCACTTGTGAAAATTGATATTGGCAATGTTTTGGATTCTGTTCACAATTGCAAAGGAGCACTAGCTGCATTTGAAGAGAGCTACAGGATTGCTGTTGAAGCTAACCTTCCTTCTGTACAGCTTTCTGCCCTGGAAAATATGCACTATAGCAACATGATAAGATTTGATAATGAGAATGAAACCAGGAGGTTGAAACTCTTAATTGATCAGCTGAAGAAATCAATAGATAAAGACACTGAACCAAAAGATATACAAGAGGATTACTGCTCTGAGACTGATACTGAAGAAGGTTATCTCTCAAATAGTGGATCTGAATCAAAAATGACTACTGCTCGAGAAGATTGGAACGATGACATGCCCCTGATGTCAGTCTTTCAGTCCAGAAAAAAATCATCCCAAAAAGCAGGTTTCATGGAAGGTTTTGGCAACTCTGTAGAGGAACCTCAGCAGTCACCTAAAAGCTTGCCAAAAACTACCAGTCAGAAGGCTGTTGGTTCTAAACGTGTCCGTGTAATCCTTTCCGATGATGAGGAGGAGGAAGAGAATGTTGATGAGATGGAGCATTCAAAGAGAAAGTCACGTGATTGTCAGTTAGAAGACTTCTCTACTTCTGATGCAATAGAGAGTAAAAGAAGTGGTGCCAGTCCTGCTACCAAAATTCAGGTTGTCTCAGAGTTTGGATTCAAATGTCCATTTAAGGTTGAAGAAAACAGTAGTTCCTTCAAATGCCGGAATCCTCACAGTGCCACAAAAACTGCCAGCAATTCTCGATCTCTGAGCAATGATATAGTTACCGAACCTGATATTGCTAGTTGTTCAAAATGTGATACGAATGCCTCTGGAAAACTATTGCACCATGCAATCGCCTGTCCCATGAGGCGTAGTTCTGAACGAGATCAAGATGTTACAGTCAAGATTGAAAATGACCTGATTTACATGGAAGCAACCTCGTTTGTTGCTAGTGATCAGTTGAAGTCTGAAGTTGCATGCTTATATTATCTACAGCTTCATAGAGAGAGAAGATCTGAGGGTTTGTTGCCCATCATTCAGCACATAAAATGTGCTGGAAGAGATCTGGAATCCCTAGAAACTGTGGAAAATCTTTTGCAATATCTGGGAGATGACATGGTTGAAGTTTCCGTTGATGGATGGGTTCAGAAGTGCGTAATAAAAATGTACATGGACTGCTGTGAGGAGTTGTCCGAGGTACCAAATCTCAAGGTACTCAAGAAACTATACAATTTAGAGGTTTCAGATGATGAGATTATTGTGACTGAGTGCGACCTGCAAGATTTGTCCGTAACTCCATTGTTAAATGCACTGCTTTCTCACAAAAGATTTGCAATGCTTGATCTCTCTCACAATATGTTAGGAAATGGAACGATGGAGAAACTTCAGAAAGTGTTCATGGCATCAGGCCAATCTTATGGCGGCCTGACTTTGGACTTGCATTGCAATCGGTTTGGCCCAACCGCTTTGTTTCAGATATGTGAATGCTCGGTTCTTTTTACTCGACTTGAAGTGCTTAACTTTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACTATCTTGGAAAAATGTACTGTCCTATGTAGCTTGAATGTAGAGCGCTGTCATATCACATCTAGAACCATTCAAAAGATGGCCGACGCATTGGACTCTAAATCTGTACTTTCACAGCTTTGTATTGGTTATAACAACCCTGTATCTGGAAATGCTATTGTTAATCTACTGGCCAAGCTTTCTACTTTGAAAAGGTTTTCTGAGCTGAATCTGAGTGGCTTAAAATTAGGCAAACCGGTTGTTGATACCCTTTGCCAGCTTGCAGGGACCATTACTTTATCAGGCTTAATGCTTGGAAGCACTGGAATCGGAAATGAAGGGGCAATGCAATTAGCTCGATCATTGTTCAATGAGACACAAGAACTTGTGAAACTTGACCTATCTTATTGCGGACTTACATCTAATAACTTTTTGAATGCAGGTGTTTCTTCATTTTGCTCCATTCTTGAGCTTAAAATGGAAGGAAATCCTATTATGCCAGAGGGCAGCAATACTCTCTCTTCTCTGCTAATAGACCCACAGTGCTGTCTAAAAGTTTTAGTCCTTAGAAACTGTCAGCTTGGGCTTACTGGAATTCTCCACATATTTGAGGCACTAGCAGAGAACAATTGCCTACAGGAGCTTAATCTAGCAGGTAATGCTGCTCCAAATGAACTTTCTTCTCTACAACATGATTTTTCAGTAAAAGGGTGCTCAGAAAACTTGGAGCAGAAGCTAGATACTAGTGAATTAAGTTCTCCCATGGAACTGGAAAATACTAAAGAGGTTCTTGGCACTCCCAATAATGGCAATTGTGCGCTTGAAGTTGCTAACAATCAAGATGATCAGACGAGAGTAGAAGCTGCAGCTTCTGGAATTGATGACAGTTGTGCTAGTTCATGTCAAAGAAATAATTCTTCATCTCCCAAATGCAATCATTTAATTAGAAAACTATCATCTGCTATTGGTCTGGCAAACAACCTGCAATTACTTGACCTCAGCGAAAATGGTTTCTCTGCTGAAGCTGCAGAACTGTTGTATGGTTCATGGTCATCATCGTCATCTTTGCGAAATGGTTCAAGTCACAAGCACATTACTGATCAGATTATTCATTTCTCAACCAAACAAAATAAGTGCTGCAGAGTGAAACCGTGCTGCAAGAAAGATTGA 3978 0.4085 MAGHDTELKAATTAYRNAKAEANRQEEARWANVIGNILKNRGEYVEALRWLRRDYEVSLKYLPEKHLLPTCQSLGEIYLRLERFSEALTYQKKHLELARDANDLVEQQRASTQLGRTYHELFSRSEHDHLSIRNAKKYFKSSMELAQILKEDPPTNKSSFVKEYIDAHNNIGMLEMELDNLEEAKKILTRGLEICNEEEVSEDDDGRSRLHHNLGNVYMELRMWEKARKHIEKDIQICNRIGHCQGEAKGYINLGEVHYRTQKYDEARSYYEKALTLAKSLEDEDALVRQIDENIKTVNKAVKVMDELKKEEQNFKKLKRYLAATRGSAHERKYLLQQNASVDRLLEKSSMIIAWEKHCEFAKEKKEIASELRDDEKLSDSYLALGESYQKLRNFNESIKWYRKSLELYKTIGNLEGQALVKIDIGNVLDSVHNCKGALAAFEESYRIAVEANLPSVQLSALENMHYSNMIRFDNENETRRLKLLIDQLKKSIDKDTEPKDIQEDYCSETDTEEGYLSNSGSESKMTTAREDWNDDMPLMSVFQSRKKSSQKAGFMEGFGNSVEEPQQSPKSLPKTTSQKAVGSKRVRVILSDDEEEEENVDEMEHSKRKSRDCQLEDFSTSDAIESKRSGASPATKIQVVSEFGFKCPFKVEENSSSFKCRNPHSATKTASNSRSLSNDIVTEPDIASCSKCDTNASGKLLHHAIACPMRRSSERDQDVTVKIENDLIYMEATSFVASDQLKSEVACLYYLQLHRERRSEGLLPIIQHIKCAGRDLESLETVENLLQYLGDDMVEVSVDGWVQKCVIKMYMDCCEELSEVPNLKVLKKLYNLEVSDDEIIVTECDLQDLSVTPLLNALLSHKRFAMLDLSHNMLGNGTMEKLQKVFMASGQSYGGLTLDLHCNRFGPTALFQICECSVLFTRLEVLNFSGNRLTDACGSYLSTILEKCTVLCSLNVERCHITSRTIQKMADALDSKSVLSQLCIGYNNPVSGNAIVNLLAKLSTLKRFSELNLSGLKLGKPVVDTLCQLAGTITLSGLMLGSTGIGNEGAMQLARSLFNETQELVKLDLSYCGLTSNNFLNAGVSSFCSILELKMEGNPIMPEGSNTLSSLLIDPQCCLKVLVLRNCQLGLTGILHIFEALAENNCLQELNLAGNAAPNELSSLQHDFSVKGCSENLEQKLDTSELSSPMELENTKEVLGTPNNGNCALEVANNQDDQTRVEAAASGIDDSCASSCQRNNSSSPKCNHLIRKLSSAIGLANNLQLLDLSENGFSAEAAELLYGSWSSSSSLRNGSSHKHITDQIIHFSTKQNKCCRVKPCCKKD 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00624 1325 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Accr8g00624 1325 PANTHER PROTEIN TONSOKU 1 1325 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Accr8g00624 1325 SMART tpr_5 165 198 IPR019734 GO:0005515
Accr8g00624 1325 SMART tpr_5 68 101 IPR019734 GO:0005515
Accr8g00624 1325 SMART tpr_5 379 412 IPR019734 GO:0005515
Accr8g00624 1325 SMART tpr_5 248 281 IPR019734 GO:0005515
Accr8g00624 1325 SMART tpr_5 28 61 IPR019734 GO:0005515
Accr8g00624 1325 SMART tpr_5 419 452 IPR019734 GO:0005515
Accr8g00624 1325 SMART tpr_5 208 241 IPR019734 GO:0005515
Accr8g00624 1325 Gene3D Tetratricopeptide repeat domain 336 509 IPR011990 GO:0005515
Accr8g00624 1325 FunFam Protein TONSOKU 3 157 - -
Accr8g00624 1325 FunFam Protein TONSOKU 814 1186 - -
Accr8g00624 1325 Pfam Tetratricopeptide repeat 166 195 IPR019734 GO:0005515
Accr8g00624 1325 Pfam Tetratricopeptide repeat 28 99 - -
Accr8g00624 1325 Pfam Tetratricopeptide repeat 208 280 - -
Accr8g00624 1325 Pfam Tetratricopeptide repeat 381 449 - -
Accr8g00624 1325 Coils Coil 8 28 - -
Accr8g00624 1325 SMART LRR_RI_2 1033 1060 - -
Accr8g00624 1325 SMART LRR_RI_2 862 889 - -
Accr8g00624 1325 SMART LRR_RI_2 921 948 - -
Accr8g00624 1325 SMART LRR_RI_2 1261 1288 - -
Accr8g00624 1325 SMART LRR_RI_2 1088 1115 - -
Accr8g00624 1325 SMART LRR_RI_2 1117 1144 - -
Accr8g00624 1325 SUPERFAMILY TPR-like 157 285 IPR011990 GO:0005515
Accr8g00624 1325 SUPERFAMILY TPR-like 20 200 IPR011990 GO:0005515
Accr8g00624 1325 SUPERFAMILY TPR-like 363 464 IPR011990 GO:0005515
Accr8g00624 1325 ProSiteProfiles TPR repeat region circular profile. 248 277 - -
Accr8g00624 1325 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Accr8g00624 1325 MobiDBLite consensus disorder prediction 512 527 - -
Accr8g00624 1325 MobiDBLite consensus disorder prediction 562 583 - -
Accr8g00624 1325 MobiDBLite consensus disorder prediction 496 634 - -
Accr8g00624 1325 Gene3D Tetratricopeptide repeat domain 3 311 IPR011990 GO:0005515
Accr8g00624 1325 SUPERFAMILY RNI-like 832 1293 - -
Accr8g00624 1325 Gene3D Ribonuclease Inhibitor 814 1208 IPR032675 -
Accr8g00624 1325 MobiDBLite consensus disorder prediction 602 624 - -
Accr8g00624 1325 Coils Coil 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00624 Accr-Chr8 9944267 9956764 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00624 - - pcin:129307840 2276.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00624 8 9944267 9956764 Accr8g00624 8 9944267 9956764 ECH