Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00610 ATGAGAGCCACAATGGGTCATTCCACACATGCAGTTGAAGCTAGACACCGTTTACCTACTTCCATTGAAGACTTGAAACGAAGATTGCCAAGAAGTAAGACGAAAGATTTGGAGAAGCCTTTCCATTTAACAAGCCAAGACAAGAGCTCATCAAGATGCAAACTTTCCCTTTTAAAACTCATCCTATTACTAACCATTTCTGGCACTTTTGTAACTCTTCTCTATGCTCCTGAGGTTTATAACACTAACCACTTATCAAGCTCAGGTTCTGGGTGGATATGGGGCGGCTCAGATACCCGATATATATCGAACGAGGACATTAATTGGAATGATATATTGGCAGTGACAAGGAAGGTGGGTGGGAAAAATGAATTGCAAGGGGTTGGTCTTCTGAACTTGAACAATTCTGAAGTAGAGAAATGGGAGAAACTCATGCCTGATGCTAAGAACATAGTATTGCATCTTGAGTATGCAGCAAGAAATGACACCTGGGAGTCTCTATACCCAGAATGGATTGATGAGGAAGAAGAAACTGAAGTCCCAGTTTGCCCGTCTCTACCGAGTCTTAGATCTCCCGGAACAAGACTTAATCTCATAGTTGTGAAACTTCCTTGTCGCCGGACGAAAAATTCGAATTGGTCAAGAGATGTTGCTAGGCTTCACCTGCAGCTTGCTGCAGCAGGGCTTGCAGCCTCTTTTAAAGGCAATTACAGTGTGCATGTTCTCTTCATTAGTAATTGCTTTCCAGTACCAAATCTCTTTACCTGCAAAGAACTTGTTGCACGTGAAGGAAATGTTTGGCTGTACAAGCCAAACTTGAGTGTCTTGAGACAAAAAGTTCAGCTCCCAGTTGGATCTTGTGAACTTGCAATTCCCATGAGGGGTAAAGAGCTGGTGTATGCTGGCAATGTACACAGAGAAGCCTATGCAACAATTCTTCATTCAGCTCATGTTTATGTCTGTGGAGCCATAGCTGCTGCACAAAGCATACGCATGTCAGGTTCAACCAGGGACCTTGTGATACTTGTTGATGAGACCATAAGTGGATACCACAGAAGTGGTTTAGAAGCAGCAGGATGGAAAGTAAGAATAATTCAAAGAATTAGAAACCCGAAAGCCGAAAAAGATGCCTACAACGAATGGAACTACAGCAAATTCAGACTATGGCAGCTCACAGACTATGACAAGATCATATTCATTGATGCAGACTTACTCATACTCAGAAACATAGATTTCCTTTTTGGATTGCCAGAAATTACAGCCACAGGAAACAATGCCTCACTTTTTAACTCAGGTGTTATGGTGGTTGAGCCTTCCAATTGCACATTCCAGCTTCTGATGGATCATATTAATGAGATAGAGTCCTACAATGGAGGAGATCAAGGGTATTTAAATGAGATATTCACATGGTGGCATAGGATTCCGAGGCACATGAACTTCTTGAAGCATTTCTGGGTTGGTGATGAGGAAGAGAAGAAAAAAATGAAGACAATGCTTTTTGGAGCAGACCCTCCAATTCTCTATGTTCTTCATTATCTAGGAATGAAGCCATGGCTATGCTTTAGGGACTATGACTGTAACTGGAACTTCGATATCTTTCACGAGTTTGCAAGCGATGTTGCTCACGAGAGATGGTGGAGGGTTCATGATGCAATGCCCGAGGTATTGCAGCAGTTTTGTCTGTTGCAGTCAAAGCAGAAGGCACAGTTAGAGTTTGATAGGAGGCAAGCTGAGAAGGCAAATTATACGGATGGACATTGGAGGATTAAAGTGAAGGATTGGAGATTGAAAAGGTGTATAGATAATGTGTGTAATTGGAAGGGCATGTTGAAGCACTGGGGAGAGAATAATTGGACTGATGTTGAGCCTTATTATAATCCAACACCACCTGCAGTTACTGCTACAAACAAAGCTTCTCTTTCTGGCCTCTGA 1932 0.4229 MRATMGHSTHAVEARHRLPTSIEDLKRRLPRSKTKDLEKPFHLTSQDKSSSRCKLSLLKLILLLTISGTFVTLLYAPEVYNTNHLSSSGSGWIWGGSDTRYISNEDINWNDILAVTRKVGGKNELQGVGLLNLNNSEVEKWEKLMPDAKNIVLHLEYAARNDTWESLYPEWIDEEEETEVPVCPSLPSLRSPGTRLNLIVVKLPCRRTKNSNWSRDVARLHLQLAAAGLAASFKGNYSVHVLFISNCFPVPNLFTCKELVAREGNVWLYKPNLSVLRQKVQLPVGSCELAIPMRGKELVYAGNVHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISGYHRSGLEAAGWKVRIIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGLPEITATGNNASLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKKMKTMLFGADPPILYVLHYLGMKPWLCFRDYDCNWNFDIFHEFASDVAHERWWRVHDAMPEVLQQFCLLQSKQKAQLEFDRRQAEKANYTDGHWRIKVKDWRLKRCIDNVCNWKGMLKHWGENNWTDVEPYYNPTPPAVTATNKASLSGL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00610 643 PANTHER GLYCOGENIN SUBFAMILY MEMBER 213 599 - -
Accr8g00610 643 SUPERFAMILY Nucleotide-diphospho-sugar transferases 307 552 IPR029044 -
Accr8g00610 643 Pfam Glycosyl transferase family 8 313 519 IPR002495 GO:0016757
Accr8g00610 643 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 304 554 IPR029044 -
Accr8g00610 643 FunFam Hexosyltransferase 304 556 - -
Accr8g00610 643 CDD GT8_Glycogenin 307 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00610 Accr-Chr8 9678984 9682663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00610 13 642 Glycosyltransferase AT3G18660 65.224 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00610 K20890 - gmx:100809361 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00610 8 9678984 9682663 Accr8g00610 8 9678984 9682663 ECH