Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00573 ATGCAGCTCCATACTGTCCCTCGCTCTCCTTGCTCCTCTGGAAGTGTGTTCTTTCTGGTGGGTCATCAACTAAGCAAGTGGAAGACTTATAATGGATGTAATTTGGATACCGGATTTTTTGGAAGTAGATTCCTTCATACGAATCAGAAGGATAACAAGAGATGTATCTCGAAATTCTTTGGAGTACCCATGTTCTGTTCTGCGTCAATTAGGAGTGATTCTTTTATACCTTCTAAAGAGCAACTAAGTAATGCGCGATTGATATATTCCGTTGCTCCAGCCATGGGCCACAACCAGGAATCTCATCCGGAATCACATTTTAGGGTTCCTGCAATTGTGAATGCTCTTGAAGAAATGAAGCTGACTTCAAAGTTCCGGGGTCCTGAGATCATTGAACTTCAAAACTTTGAGCCTGCCTCAGTAGATGACGTTGCAAGAGTTCATGCAAGAGCCTATGTATCTGGTCTTGAGATGGCAATGGATCAAGCTTCAGAGAAAGGGCTTATTTTCATAGACGGCTCTGGACCAACATATGCTACAGCCACTACATTCCAGGAGTCATTAGTTGCTGCTGGAGCCGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCTTCAAAGGACAGCCAAGATCCACCCACTGGTTTTGCTTTGATTCGACCGCCTGGACATCATGCTGTTCCACAAGGGCCTATGGGCTTCTGTGTTTTTGGAAATGTGGCCATTGCAGCTCGTTATGCTCAACGTGTACATGGACTGAAGCGCGTGTTTATAATTGATTTTGATGTCCACCATGGAAATGGAACAAATGATGCTTTCTATGATGATCCAGATATATTTTTCCTCTCAACTCACCAAGATGGAAGCTACCCCGGCACTGGTAAGTTTGATGAGGTGGGAGCTGGAGATGGAGAAGGAACCACATTAAACTTGCCTCTACCAGGAGGATCAGGTGATATTTCGATGAGAACTGTGTTTGATGAAATCATTGTGCCTTCAGCTCAAAGGTTCAAGCCAGACATTATTCTTGTTTCTGCTGGGTATGATGCTCATGTGTTGGATCCACTAGCCAATTTACAGTACACAACGGGAACATACTACATGCTTGCGTCCAATATAAAACAATTAGCAAAACAATTATGTGGAGGCCGATGTGTGTTCTTCTTGGAGGGAGGATATAATCTCAAATCTCTTTCATATTCAGTGGCAGATTCATTCCGTGCACTTCTTGGTGATCGGAGTTTGGCATCTGAGTTTGATGATCCAAACATTCTGTATGAAGAGCCATCAAAAAGGGTCAAGCAAGCAATCGATAGGATAAAGGCCACGCATTCCCTGTGA 1338 0.438 MQLHTVPRSPCSSGSVFFLVGHQLSKWKTYNGCNLDTGFFGSRFLHTNQKDNKRCISKFFGVPMFCSASIRSDSFIPSKEQLSNARLIYSVAPAMGHNQESHPESHFRVPAIVNALEEMKLTSKFRGPEIIELQNFEPASVDDVARVHARAYVSGLEMAMDQASEKGLIFIDGSGPTYATATTFQESLVAAGAGLALVDSVVAASKDSQDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDISMRTVFDEIIVPSAQRFKPDIILVSAGYDAHVLDPLANLQYTTGTYYMLASNIKQLAKQLCGGRCVFFLEGGYNLKSLSYSVADSFRALLGDRSLASEFDDPNILYEEPSKRVKQAIDRIKATHSL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00573 445 PRINTS Histone deacetylase superfamily signature 254 269 IPR000286 -
Accr8g00573 445 PRINTS Histone deacetylase superfamily signature 338 348 IPR000286 -
Accr8g00573 445 PRINTS Histone deacetylase superfamily signature 220 243 IPR000286 -
Accr8g00573 445 Pfam Histone deacetylase domain 102 407 IPR023801 -
Accr8g00573 445 Gene3D Histone deacetylase domain 72 444 IPR037138 -
Accr8g00573 445 SUPERFAMILY Arginase/deacetylase 98 412 IPR023696 -
Accr8g00573 445 CDD HDAC_classII 102 409 - -
Accr8g00573 445 PANTHER HISTONE DEACETYLASE 2-RELATED 78 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00573 Accr-Chr8 9030825 9036156 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00573 - - cave:132166056 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00573 8 9030825 9036156 Accr8g00573 8 9030825 9036156 ECH