Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00346 ATGGCGGCTATCGGAGAGAGTCCACGGAGCCCAGAGGCGAAGCTTGGGATGCGAGTGGAGGATCTGTGGGACGTTCAAGAGCCACAGTTAAGTCCTACGGAGAAGCTTAACGCTTGCTTCGAAAGCATCCCTGTGTCTGCTTTTCCGTCAGCTCCTTCAAGTCAAGTGGTGGAGATAAGATCAGACGCCACCCTACCGGAAGCTGTGGAAACACTAGCACAGCACAATATTCTGAGCGCTCCGGTAGTGGATGTTAAAGCACCTGAAGGTGCTACTTGGATTGACAGATACATCGGAATAGTTGAGTTTGCAGGAATTGTTGTGTGGGTCTTGCAACAGTCTGAGCCTCTATCTCCCAAGAGTCCAACCAGCGGAGGGGCTAATGGGTTCCGTTATTCTCCAGAACTTGGGGGCTTTGGATTTGAATCTGCTGCAACAACTTCTGGCAACTATTTTGAGGATTTAACTTCTTCTGAATTTTATAAGAATACCAAGGTTTGTGATATTTCAGGATCATTCCGCTGGGCCCCATTTCTTCCATTGCAAGGATCAAACTCATTTCTGACCATGCTCTTGCTGCTTTCCAAGTATAATATGAAGAGTATTCCCGTGGTAGATCTGGGTGCAGAAAAAATTGATAATGTGATCACACAGTCCGGTGTTATTCATATGTTGGCAGAGTGCGTGGGGCTTCAGTGGTTCGAGAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCTGTAATGACCCCTGATTGTATCATTAAGGTTTATGAGGATGAACCAGTGCTTCAGGCATTTAGATTGATGAGGAAAAAGAGGATTGGAGGGTTACCCGTAATAGAAAGGGGTAGCAACAAGGCTGTGGGTAACATAAGCCTACAAGATGTTCAATTCTTGCTAACTGCTCCAGAAATTTACCACAATTATAGAGCTATTACTGTAAAATACTTCCTGACAGCGGTTAGAAGCTACTTAGAGAAGCACAAAGAGGTGTTCCCAATGTTAAGCACCTTGGTTACATGCCAAAAGGATTGCACAATCAAAGAGTTGATTCAATTGCTTGACCACGAGAAGAGTAATCGGATATATGTTGTAACTAATGATGGTGATCTAGAAGGAGTGATCACTCTGAGAGATATTATCTCAAGGCTAGTGGACGAGCCCAAAGGATATTTTGGTGATTTCTTTGATGGTGTTCTTCCTTTGCCTCCAGACAGCCGGGTTTAA 1233 0.4469 MAAIGESPRSPEAKLGMRVEDLWDVQEPQLSPTEKLNACFESIPVSAFPSAPSSQVVEIRSDATLPEAVETLAQHNILSAPVVDVKAPEGATWIDRYIGIVEFAGIVVWVLQQSEPLSPKSPTSGGANGFRYSPELGGFGFESAATTSGNYFEDLTSSEFYKNTKVCDISGSFRWAPFLPLQGSNSFLTMLLLLSKYNMKSIPVVDLGAEKIDNVITQSGVIHMLAECVGLQWFESWGTKKLSEVGLPVMTPDCIIKVYEDEPVLQAFRLMRKKRIGGLPVIERGSNKAVGNISLQDVQFLLTAPEIYHNYRAITVKYFLTAVRSYLEKHKEVFPMLSTLVTCQKDCTIKELIQLLDHEKSNRIYVVTNDGDLEGVITLRDIISRLVDEPKGYFGDFFDGVLPLPPDSRV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00346 410 CDD CBS_pair_SF 191 298 - -
Accr8g00346 410 SMART cbs_1 339 387 IPR000644 -
Accr8g00346 410 SMART cbs_1 254 303 IPR000644 -
Accr8g00346 410 SMART cbs_1 55 111 IPR000644 -
Accr8g00346 410 SMART cbs_1 177 226 IPR000644 -
Accr8g00346 410 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 37 386 - -
Accr8g00346 410 SUPERFAMILY CBS-domain pair 249 396 IPR046342 -
Accr8g00346 410 ProSiteProfiles CBS domain profile. 250 314 IPR000644 -
Accr8g00346 410 Gene3D - 43 232 IPR046342 -
Accr8g00346 410 ProSiteProfiles CBS domain profile. 336 392 IPR000644 -
Accr8g00346 410 Pfam CBS domain 333 387 IPR000644 -
Accr8g00346 410 Pfam CBS domain 249 298 IPR000644 -
Accr8g00346 410 CDD CBS_pair_SF 255 383 - -
Accr8g00346 410 SUPERFAMILY CBS-domain pair 28 226 IPR046342 -
Accr8g00346 410 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
Accr8g00346 410 Gene3D - 239 389 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00346 Accr-Chr8 4949761 4951975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00346 - - gmx:100780629 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00346 8 4949761 4951975 Accr8g00346 8 4949761 4951975 ECH