Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00328 ATGGCTCTTTACCTTCTCTACGAATCCGCTTCTGGCTACGCCCTCTTACATGCTCATGGCCTCGATGAGATTGGGCAGAACACCGAAGCGGTTCGGAACTCTGTTTCCGACTTGAACCGGTTCGGCAAGGTCGTGCAGCTCGTGGCATTTTCTCCTTTCCAATCGGCTCTTGATGCTCTTAAGCAATGCAACTCTGTTTCTGAAGGTCTGTTGACTGATGAACTGAGAAGTTTTCTGGAGATCAATCTTCCAAAAGTTAAGGGAGGCAAGAAGGCGAAGTTCAGTTTAGGTGTAGTAGATACTAAGATTGGTTCTCAGATCTCTGAAGTGTCTAAAATTCCATGTCAAAGTAATGAGTTTGTGGGTGAGCTGCTTCGAGGCGTTCGGCTCCATTTTGATAGATTTCTCAATGATCTCAAGCCTGGAGATTTGGAAAAAGCTCAACTTGGTCTGGGGCATAGTTACAGCAGGGCAAAAGTGAAATTTAATGTTAACCGAGTTGACAATATGGTCATTCAAGCAATCTTCCTGCTTGACACACTTGATAAAGATATCAATTCTTTTTCCATGAGAGTCAGGGAATGGTACTCGTGGCATTTTCCTGAACTGGTGAAGATTGTAAATGACAATTATCTATATGCCAGAGTTGCAAAATATATTGAAGATAAGTCAAAGCTGTCTGAGGACAATATCTCAGGCTTAACAGAAATAGTTGGAGATGAGGACAAGGCAAAAGAGATTGTGGAAGCTGCCAAGGCGTCTATGGGGCAGGATTTGTCTCCCGTGGACCTAATCAATGTCCAGCAATTTACTAAAAGGGTAATGGACCTATCTGAGTATAGGAGGAAGCTTTATGATTATCTTGTTACTAAGATGAATGATATTGCACCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGCGCTCGATTGATTTCACATGCTGGAAGCCTCACTAATTTGGCCAAGTGCCCCTCTTCTACTCTTCAGATTCTTGGTGCAGAAAAGGCTTTGTTCAGGGCATTGAAAACCAGAGGCAATACTCCCAAATATGGTCTGATATTCCACTCATCCTTTATTGGTCGAGCATCTGCAAAAAACAAAGGCCGAATGGCTCGCTATCTATCGAATAAGTGTTCAATTGCATCACGCATAGACTGCTTTTCTGAAAGGGGCAGTACAGCTTTTGGAGAGAAACTCCGTGAGCAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGGGTTGCCCCTCGTAAGAACATTGATGTCATGAAGGCTGCTATTGAAAGTGCTGAAGATAAAGATACTGAGATTGCTACAGAAGCATCTGGCAAGAAGGGTAAAAAGAAGGCAAAAGCTGCTCCTGCTGCAAATGGAGTTGAAGAAATGGCTGTTGATAAGCCCAACGGAATTTCAAATGGTCATGCACTAGAGAATCACAAATCAGAAAAGAAACAGAAGAAGAAAGAAAAGAGGAAATTGGACGTGGACTCGGAGATGCAGGATGTGGCCGCTCAAGATGATGAAAATAATGCCATGGCAAATGGAGAAGTTAAGAAGAAGAAGAAGAAGAAAGATGATGATGGTGAAGTACAGGACACTGCTATCAAGACTAAGAAGAAGAAGAAATCCAAAAATGAGGATGATGAGTAA 1653 0.4259 MALYLLYESASGYALLHAHGLDEIGQNTEAVRNSVSDLNRFGKVVQLVAFSPFQSALDALKQCNSVSEGLLTDELRSFLEINLPKVKGGKKAKFSLGVVDTKIGSQISEVSKIPCQSNEFVGELLRGVRLHFDRFLNDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARVAKYIEDKSKLSEDNISGLTEIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFTKRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLSNKCSIASRIDCFSERGSTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESAEDKDTEIATEASGKKGKKKAKAAPAANGVEEMAVDKPNGISNGHALENHKSEKKQKKKEKRKLDVDSEMQDVAAQDDENNAMANGEVKKKKKKKDDDGEVQDTAIKTKKKKKSKNEDDE 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00328 550 Gene3D Nop domain 299 422 IPR042239 -
Accr8g00328 550 MobiDBLite consensus disorder prediction 432 550 - -
Accr8g00328 550 FunFam Nucleolar protein 56 299 411 - -
Accr8g00328 550 SMART NOSIC_2 170 222 IPR012976 -
Accr8g00328 550 Gene3D - 141 298 - -
Accr8g00328 550 SUPERFAMILY Nop domain 163 412 IPR036070 -
Accr8g00328 550 MobiDBLite consensus disorder prediction 432 448 - -
Accr8g00328 550 FunFam Nucleolar protein 56 140 298 - -
Accr8g00328 550 MobiDBLite consensus disorder prediction 513 550 - -
Accr8g00328 550 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Accr8g00328 550 Coils Coil 477 497 - -
Accr8g00328 550 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 524 IPR045056 GO:0030515|GO:0031428|GO:0032040
Accr8g00328 550 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Accr8g00328 550 MobiDBLite consensus disorder prediction 477 500 - -
Accr8g00328 550 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00328 Accr-Chr8 4706104 4709522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00328 K14564 - gmx:100779446 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00328 8 4706104 4709522 Accr8g00328 8 4706104 4709522 ECH