Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00199 ATGTCATCCACGCCGGCGAGAGATAACGGGATCTTTAGCCGGATGGCGAGCCTTCCTCGGAGCATTATGGGGGAGATTTCAAGGGCTATGAGTGATATAGGATCAGGAAGAAGGAGACGACGATCAAGAAATGAAAACGAATTACTCTCTTCTTCATCTTCAGATTTCCAGTTCCAGCCATTTGAGCCGATTGATCCGGCGGCAGCTGTTCGGGAGGATCAGTGGGCTTTTCTGGAAAGTTTTGAGCGTCGATACGGCACCGTTCATCCTTTCTTCTACGCCTGCCGTTTAATGGAAGTTCTGAAACTTGCAGAGCATGACAAGAAGTTGGTGTTCATGTACATCCATTCACCAGAACACCCTTTCACGCACAATTTCTGTAGAGAAACACTGTGTAGTGAGCTTGTGACTGAGTTTCTTGACGTCAACTTTATTTGCTGGGGAGGTTTCTCCGATAGCGGCGAAGGTATGCGTATGGTGGCCACTCTTCGCCCTGCTAGCTTCCCCCTCTGCGCGGTCGTCGCCCCTGCTGCCGGCGATTCCATGGCGGTTCTGCAACAGATAGAAGGGCCGGTTTCAGCGGCGGAGCTAGTGGAGGTTTTACAGAGAACAATGGAGGAGCAAGGGTTGGCATTTGGAAGTGACAGAGCTCGGCAGGAAGAAATGCTCAGAGCTGATCGTCGGATAAGAGAAGAACAAGATGCTGCATATCTTGCATCTTTGAGGATTGACAAGGAAAAAGAAAAACTCAGTAATTCAACTTCAATAACAGAAAGTATTCAGAAACCAGTACAAGCATTAAACTCCAGAAATTACGAGAAGCCTAAGAATAACAGTTCTGTGAGCAAACACAGCTCTAAAGTGAATCAAAACACTACCGCTGCGCAAAATCAAAATAAAGGAGTTCCGGGCCTGTCTCAACCCACTCAGATATTGATAAGGTTTCCAAATGGACAAAGAAGGGAGCAGAGATTTGATTGCAGTGACAAAATACAAGCAATTTTTGCATTCATTGATTCACTGGGTATGCCTGGGATTGGCAACTACAGATTGGTGTCAAACTTCCCAAGAAGAGTGTATGGCGTTGATCAGATGAGAATGACTCTCAAAGATGTGGGCTTGCATCCCAAAGCTAGTCTTTTCCTTGAGCCCTTACCCGCTGACCTGTAG 1170 0.4684 MSSTPARDNGIFSRMASLPRSIMGEISRAMSDIGSGRRRRRSRNENELLSSSSSDFQFQPFEPIDPAAAVREDQWAFLESFERRYGTVHPFFYACRLMEVLKLAEHDKKLVFMYIHSPEHPFTHNFCRETLCSELVTEFLDVNFICWGGFSDSGEGMRMVATLRPASFPLCAVVAPAAGDSMAVLQQIEGPVSAAELVEVLQRTMEEQGLAFGSDRARQEEMLRADRRIREEQDAAYLASLRIDKEKEKLSNSTSITESIQKPVQALNSRNYEKPKNNSSVSKHSSKVNQNTTAAQNQNKGVPGLSQPTQILIRFPNGQRREQRFDCSDKIQAIFAFIDSLGMPGIGNYRLVSNFPRRVYGVDQMRMTLKDVGLHPKASLFLEPLPADL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00199 389 SUPERFAMILY Thioredoxin-like 72 210 IPR036249 -
Accr8g00199 389 PANTHER FAS-ASSOCIATED PROTEIN 5 383 - -
Accr8g00199 389 SUPERFAMILY Ubiquitin-like 297 385 IPR029071 -
Accr8g00199 389 SMART 45neu3 76 202 IPR006577 -
Accr8g00199 389 MobiDBLite consensus disorder prediction 32 60 - -
Accr8g00199 389 ProSiteProfiles UBX domain profile. 309 382 IPR001012 GO:0005515
Accr8g00199 389 CDD UAS 97 207 - -
Accr8g00199 389 CDD UBX 311 383 - -
Accr8g00199 389 Gene3D - 308 386 - -
Accr8g00199 389 MobiDBLite consensus disorder prediction 250 307 - -
Accr8g00199 389 Gene3D Glutaredoxin 65 210 - -
Accr8g00199 389 SMART ubx_3 299 384 IPR001012 GO:0005515
Accr8g00199 389 MobiDBLite consensus disorder prediction 253 307 - -
Accr8g00199 389 MobiDBLite consensus disorder prediction 32 46 - -
Accr8g00199 389 Pfam UBX domain 307 383 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00199 Accr-Chr8 2751064 2753020 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00199 K18726 - gmx:100775212 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00199 8 2751064 2753020 Accr8g00199 8 2751064 2753020 ECH