Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00147 ATGTTGTGGAGGCGAAGAAAAGAAATGGATATAGCTGAATTGCTGATGAGGGATTTTAAAGTGATGAGAGAAGATGGGTTTGATATATTTGAAGTGGTGTTTCATGGTCCAAAAATGAGTCCTTACGAAGGTGGAGTCTGGAGAATTCGCGTTGAACTTCTGCCTGAATATCCATTAGAACCCCCCAGATTGTTTTTTGTGAATTCCATATTTCACCCAAATATTGATTTTGTAAGTGGTTTGATATGCTCGAATTGTCTTTACTTGGATCATCTTGAAACAGGCTGGACTCCAATCGATGATCTTGCAGTAACCTTTCAACACTGTATTCCAAAACTTTTGTTTGATCCAAATCTTGAATGTCCAACAAATCCTGAAGCGGCAGAGATGCTTAAACATGATGAAGGGCACTACAAACAACTAGTTAGAGAATTTTGTGAAATGTTTGCAAATATGGAAGGCATGCTATCTGAAAAGTCGTCAGGCCATGAAGAGAGTGGAAGTGAGGACTGA 513 0.3899 MLWRRRKEMDIAELLMRDFKVMREDGFDIFEVVFHGPKMSPYEGGVWRIRVELLPEYPLEPPRLFFVNSIFHPNIDFVSGLICSNCLYLDHLETGWTPIDDLAVTFQHCIPKLLFDPNLECPTNPEAAEMLKHDEGHYKQLVREFCEMFANMEGMLSEKSSGHEESGSED 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00147 170 Gene3D Ubiquitin Conjugating Enzyme 2 161 IPR016135 -
Accr8g00147 170 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 30 138 - -
Accr8g00147 170 Pfam Ubiquitin-conjugating enzyme 16 145 IPR000608 -
Accr8g00147 170 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 151 IPR000608 -
Accr8g00147 170 CDD UBCc 4 146 IPR000608 -
Accr8g00147 170 SUPERFAMILY UBC-like 4 150 IPR016135 -
Accr8g00147 170 SMART ubc_7 2 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00147 Accr-Chr8 2088579 2089933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00147 K10576 - sind:105164074 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00147 8 2088579 2089933 Accr8g00147 8 2088579 2089933 ECH