Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00143 ATGGGGCACAGCAAGCGAAAGAAAGGCACAAAAATGGATCCAAGAGTAATGGACTCTGTTGTTAGAGTGTCTTGTGTACACTCACCACCTAATTTTTCTCAGCCGTGGCAGAGGATGAAGCCGTACAACTCTAGTAGTACTGGGTTCGTTATTAGTGGGAGGAGGGTGCTCACCAATGCCCATTCAGTGGAGCACTACACCCTGGTCATGCTCAAGAAACGTGGTTCCGATACCAATTACTTGGCCACTGTGCTGGCCATTGGGACCGAGTGTGACATTGCCATGCTTACTGTTGCAGATGACAAATTCTGGGACGGAATGTCACCTGTAGAGTTTGGGGAGGATTTGCCCACACTGCTAGATACAGTTACTGTTGTTGGTTACTTGATTGGTCGTGACTTTATTTCAGTGACTCGTGGCTTGTTAGCTCACATTCAGATTATATCTTATATTCATGGTTCTACTAAACTTCTAGGATTACAGATAGATGCTGCTATAAACCCTGGTAATTATGGTGGGCCTGCATTTAATGATACAGGAAGTTGTGTGGGAATTGTATTTCAGCCTGTAGATGAAAAAAATAGAGTTCATCTCATTCCGACACCAGTTATCAAGCATTTCATTCGTGATTATGAAAAGAATGGAGCATATACAGGATTCCCTGCCCTTGGGATTGAGTGGCAGAAAATGAGAAATGAACTGAGAATGACAATGGGCATGGGATCTGATATCAAGGGGATACGTATTAAAAGAATAGATCCAAGTGCTCCAGCATATGGAGTTTTGAAACCATCAGATGTTATTCTTAGCTTTGATGGGGTTGATGTCGCCAATGATGGGACAGTTTTATTTCGACCACGAGGACACATTAATTTCAGTTATCTTATATCTCAGAAATACACTGGGGATAACATAGTGGTCAAAGTGTTGCGAAATTCAGAGATCTACGAATTTGACGTTACACTTAGTTGCAAAAAGCTTATTCCAGCATATAGCCAGGGCAGGTCTCCCTCATATTATATCATTGCAGGATTTGTTTTTACAGCTGTCTCAGTTCCATATCTTCATTCTGAGTATGGGGAGGATTATAACATCAAGGCTCCGATCAAGCTTTTGGATAAACTAGATTCAATGCCAAAGTCACCAGACGAGCAACTTGTTGTGATCTCTCAGGTGCTGGTAGATGATATCAACTTTGGGTATGAAGATATTACTAATAATCAGGTACTTGCTTTTAATGGTAAACCTATTAAAAATCTGAAGAGCTTGGCCAGCCTGGTTGAGAATTGCAATGATGAACATCTAGAATTCAGTCTAGAGGATGATCAGATAGTGGCTCTTCGGACAGCTAGGGCTAAAGATGCTACTCTCGATATTCTTGACACGTACTGCATTCCGTCAGCCATGTCGGACGATCTTTTACCTTATCTTTTGAAATGTTCAAATATGTAG 1452 0.4153 MGHSKRKKGTKMDPRVMDSVVRVSCVHSPPNFSQPWQRMKPYNSSSTGFVISGRRVLTNAHSVEHYTLVMLKKRGSDTNYLATVLAIGTECDIAMLTVADDKFWDGMSPVEFGEDLPTLLDTVTVVGYLIGRDFISVTRGLLAHIQIISYIHGSTKLLGLQIDAAINPGNYGGPAFNDTGSCVGIVFQPVDEKNRVHLIPTPVIKHFIRDYEKNGAYTGFPALGIEWQKMRNELRMTMGMGSDIKGIRIKRIDPSAPAYGVLKPSDVILSFDGVDVANDGTVLFRPRGHINFSYLISQKYTGDNIVVKVLRNSEIYEFDVTLSCKKLIPAYSQGRSPSYYIIAGFVFTAVSVPYLHSEYGEDYNIKAPIKLLDKLDSMPKSPDEQLVVISQVLVDDINFGYEDITNNQVLAFNGKPIKNLKSLASLVENCNDEHLEFSLEDDQIVALRTARAKDATLDILDTYCIPSAMSDDLLPYLLKCSNM 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00143 483 Gene3D - 220 326 IPR036034 GO:0005515
Accr8g00143 483 PANTHER - 8 474 - -
Accr8g00143 483 Gene3D - 327 475 IPR046449 -
Accr8g00143 483 CDD PDZ_serine_protease 221 320 - -
Accr8g00143 483 Gene3D - 105 213 IPR043504 -
Accr8g00143 483 Gene3D - 3 103 IPR043504 -
Accr8g00143 483 Pfam PDZ domain 221 322 IPR001478 GO:0005515
Accr8g00143 483 PRINTS HtrA/DegQ protease family signature 48 60 IPR001940 GO:0004252|GO:0006508
Accr8g00143 483 PRINTS HtrA/DegQ protease family signature 76 96 IPR001940 GO:0004252|GO:0006508
Accr8g00143 483 PRINTS HtrA/DegQ protease family signature 156 173 IPR001940 GO:0004252|GO:0006508
Accr8g00143 483 PRINTS HtrA/DegQ protease family signature 261 273 IPR001940 GO:0004252|GO:0006508
Accr8g00143 483 SUPERFAMILY Trypsin-like serine proteases 14 215 IPR009003 -
Accr8g00143 483 Pfam PDZ domain 329 472 IPR041517 -
Accr8g00143 483 ProSiteProfiles PDZ domain profile. 224 278 IPR001478 GO:0005515
Accr8g00143 483 Pfam Trypsin-like peptidase domain 47 185 - -
Accr8g00143 483 SUPERFAMILY PDZ domain-like 245 323 IPR036034 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00143 Accr-Chr8 1968049 1972485 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00143 K25897 - gmx:100817187 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00143 8 1968049 1972485 Accr8g00143 8 1968049 1972485 ECH