Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00127 ATGACTATGATTCGTCGCAATTGTTTGAGTTGGGCTGTACTATGCCTACTGGTTCTTTCGGCCGTCCTCTTTGACCCGTCCGTCTCTGAAACTCAATCCCATTGGGCTGCCAAGAAAAAACGCATGAGAGAGAAAGCTCGTGAGATGTTTTACCATGCATATGACAACTACATGACTCATGCATTCCCGCATGATGAGCTAAAGCCTCTAACCAAAACATTCACAAACTCCCTTAGTGAGCTGGGAAATTTGAACCTTGAACACTTGCCTCAAGACTACAATGGATCGGCTCTTACACTTATTGAATCATTGTCTAGCCTCGTTATTATGGGCAACAGCACTGAATTCAAGAGGGCAGTGCTCTGGCTTTCTGAAAATCTAACATTTGATGTTGATGCACGAATAAATCTTTTTGAGTGCAACATTAGAGTCCTTGGAGGACTTATCTCTGCTCATCTTCTTGCATCTGATTCTGCAAATAATTTGTTTCAAGGAGCCTACAATAATGAGTTGCTAGTACTGGCTGAAGATTTAGGGAACCGCTTTCTACCAGCATTTAATACGCCAACGGGATTGCCATATGCATGGATCAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCGGGTTGTGGTTCTTTGATTCTTGAAATGGGTGCTTTATCAAAATTGACCGGTGATCCTATATATGAATCATTGGCTTTACGTGCTCTACACAAGCTATGGAGCATGCGGAGTTCATTGAATTTATTTGGAACTACTCTAGATGTGGAAACTGGGGAATGGATAGAGTTTTCATCAGGAATTGGAGCAGGGGTTGATTCATTCTATGAGTATCTTCTTAAAGCCCATATCCTTTTTGGGAAGGAAGACTTCTGGAGAATGTTTCGTCTTGCTTATGTTGCTGTGCAGAAATATTTCAGACATGGTCCTTGGTACCATGAAGCTGATATGAGGACAGGAAGAGCAACTTATTGGCAACTTACAAGCCTTCAAGCATTTTGGCCTGGCTTACAGGTTCTTATTGGGGATATTACAGCTGCTAATTCAACGCATCGTGAATTCTACCATGTCTGGGAGAAATTTGGAGTGCTTCCAGAGAGGTATTTGCTGGACCATCAGATGCTGCATCCTACTGAAAAATATTATCCATTGCGCCCTGAATTTGCAGAGTCAACATTCTATTTATATCAAGCAACTAAAGATCCATGGTATATTGAAGTGGGTGAATCAATAATTAATTCCCTGAACACTTACACCAAAGTTGAAGGTGGGTTTGCAAGCATCAAGGATGTGAAAACAATGGAGCTGGAAGATCATCAACATAGTTTTTTCCTTGCTGAAACGTGCAAATATTTGTATCTTCTATTTGACGATTCATTTGTAAAAGAAGGTAATTACGTATTTACCACTGAAGGCCATCCTCTTCCAGTACTAAGTGTTTGGCAAGAAAGGCTCCCAGAAACTTACATTCCTACTAATTGGACTTACATGAAGAGTGAAAAAGCCTATAAAATAAGTGCGATGTCAATGCAAGTATGTCCCGCAGTGACTCTAAGTTCAGGGAAACATATTGAGAGTGGATGCCACGTGCCTGATGGTCGCAGTGACCACAGGTGTTTTGCTGATGAAGATTGTGGAGTTGACTCCACAACATGTAGAAGAAGGTCTTGTAGTATGGCTGGTTATTGTGGGTTGTGGTTCTCTATATGA 1728 0.4115 MTMIRRNCLSWAVLCLLVLSAVLFDPSVSETQSHWAAKKKRMREKAREMFYHAYDNYMTHAFPHDELKPLTKTFTNSLSELGNLNLEHLPQDYNGSALTLIESLSSLVIMGNSTEFKRAVLWLSENLTFDVDARINLFECNIRVLGGLISAHLLASDSANNLFQGAYNNELLVLAEDLGNRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKLTGDPIYESLALRALHKLWSMRSSLNLFGTTLDVETGEWIEFSSGIGAGVDSFYEYLLKAHILFGKEDFWRMFRLAYVAVQKYFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDITAANSTHREFYHVWEKFGVLPERYLLDHQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGESIINSLNTYTKVEGGFASIKDVKTMELEDHQHSFFLAETCKYLYLLFDDSFVKEGNYVFTTEGHPLPVLSVWQERLPETYIPTNWTYMKSEKAYKISAMSMQVCPAVTLSSGKHIESGCHVPDGRSDHRCFADEDCGVDSTTCRRRSCSMAGYCGLWFSI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00127 575 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 13 507 IPR044674 GO:0004571|GO:1904380|GO:1904382
Accr8g00127 575 Pfam Glycosyl hydrolase family 47 49 482 IPR001382 GO:0004571|GO:0005509|GO:0016020
Accr8g00127 575 Gene3D - 31 493 IPR012341 GO:0005975
Accr8g00127 575 SUPERFAMILY Seven-hairpin glycosidases 40 496 IPR036026 GO:0004571|GO:0005509|GO:0016020
Accr8g00127 575 PRINTS Glycosyl hydrolase family 47 signature 134 152 IPR001382 GO:0004571|GO:0005509|GO:0016020
Accr8g00127 575 PRINTS Glycosyl hydrolase family 47 signature 275 292 IPR001382 GO:0004571|GO:0005509|GO:0016020
Accr8g00127 575 PRINTS Glycosyl hydrolase family 47 signature 448 468 IPR001382 GO:0004571|GO:0005509|GO:0016020
Accr8g00127 575 PRINTS Glycosyl hydrolase family 47 signature 389 413 IPR001382 GO:0004571|GO:0005509|GO:0016020
Accr8g00127 575 PRINTS Glycosyl hydrolase family 47 signature 49 69 IPR001382 GO:0004571|GO:0005509|GO:0016020
Accr8g00127 575 PRINTS Glycosyl hydrolase family 47 signature 184 203 IPR001382 GO:0004571|GO:0005509|GO:0016020
Accr8g00127 575 PRINTS Glycosyl hydrolase family 47 signature 332 348 IPR001382 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00127 Accr-Chr8 1747282 1752223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00127 14 572 Glycoside Hydrolase AT1G27520 75.532 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00127 K10084 - gmx:100793674 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00127 8 1747282 1752223 Accr8g00127 8 1747282 1752223 ECH