Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00107 ATGGTTTCTGATTCAATCACCACCGCTCCGATTCCTTCAGCGGCAAACGCCAAGAACCTGGGCAAGAAAAAAAGGACCAACAGGTCTGCTAAACTAAAGCAATGTAAGATTGATGCCCGTCGCGAGCAGTGGCTTTCTCAAGTTTTGGTCAAGAATAAGAAATGCAAGGACGGAGGGGACGATGGCCGCGCACCCCCGATGCCTGTAGGGGAAGATAGTAAACGTTCATGGGAGAAATTGGAGACGAGTCCTAGAGCTGAAGAGATCGAGGGATCGATCCTTCAAGATGGCTACATGGAATCTTTATCCAATAGTCCCTCCAGTGTTAATAGTAGCATGTTGGGGAGTAATGATTCTGGAAGAAATTTCTCTGGGAGCAGCGGTAGCAGCAGCAGCAGCGCCGGGTCCTGCTCTGGTAATGTCACAGAAGAAGAAGGCGATGATGATTGCTTGGATGATTGGGAAGCTGTGGCTGATGCTTTAGCTGCCGATGACAAGCACCAAAGTCCATGTACGGAGCTGCCCCCCGCTCAAGAACCAGTAGTGCAAATGGTTTCGCCTGGTGAAATGACTCATGGGTTGAATTTAGGTGCAGGGAAGTCTAAAACCGAGAGTGACAGAATAGTTTCAACGGCCTCTGGCAACAGCCGAGCCTGGAGGCCTGATGATGCTTTTCGTCCTCAGAGTCTTCCTAATTTATCTAAGCAGTATAGTTTACCAAATCCAGATTCTCGTAGTGGAGGAGGGATCCCATGGGCTCGCGCTGCTGCGCCTTCCCCTTGCCCAATATGCTGTGAGGACCTTGACTTGACAGATTCATGTTTTTTACCTTGCTTGTGTGGGTTTCGGATTTGCCTCTTCTGTCACAAGAGGATACTTGAGCAGGATGGCCGCTGCCCTGGGTGCAGGAAGCCTTACGATTGCAAATCTGTTGAACCAGAGGCAAATGTCCATGGAGGCAGCCTGACTCTTCGTTTGGAGCGCTCTCATAGCATGATTTATAGGGCATAA 1011 0.4975 MVSDSITTAPIPSAANAKNLGKKKRTNRSAKLKQCKIDARREQWLSQVLVKNKKCKDGGDDGRAPPMPVGEDSKRSWEKLETSPRAEEIEGSILQDGYMESLSNSPSSVNSSMLGSNDSGRNFSGSSGSSSSSAGSCSGNVTEEEGDDDCLDDWEAVADALAADDKHQSPCTELPPAQEPVVQMVSPGEMTHGLNLGAGKSKTESDRIVSTASGNSRAWRPDDAFRPQSLPNLSKQYSLPNPDSRSGGGIPWARAAAPSPCPICCEDLDLTDSCFLPCLCGFRICLFCHKRILEQDGRCPGCRKPYDCKSVEPEANVHGGSLTLRLERSHSMIYRA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00107 336 MobiDBLite consensus disorder prediction 50 148 - -
Accr8g00107 336 FunFam RING/U-box superfamily protein 254 319 - -
Accr8g00107 336 Pfam RING/Ubox like zinc-binding domain 261 307 - -
Accr8g00107 336 MobiDBLite consensus disorder prediction 1 34 - -
Accr8g00107 336 CDD mRING-HC-C4C4_CNOT4 261 304 IPR039515 -
Accr8g00107 336 MobiDBLite consensus disorder prediction 229 243 - -
Accr8g00107 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 318 IPR013083 -
Accr8g00107 336 MobiDBLite consensus disorder prediction 196 246 - -
Accr8g00107 336 MobiDBLite consensus disorder prediction 97 140 - -
Accr8g00107 336 SUPERFAMILY RING/U-box 259 313 - -
Accr8g00107 336 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 257 317 IPR039780 GO:0004842|GO:0030014
Accr8g00107 336 ProSiteProfiles Zinc finger RING-type profile. 261 303 IPR001841 -
Accr8g00107 336 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00107 Accr-Chr8 1505020 1506260 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00107 - - qsa:O6P43_030922 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00107 8 1505020 1506260 Accr8g00107 8 1505020 1506260 ECH