Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00221 ATGGCGGGAGAAACATCATGGATCATTCCCTACCTTGATAATGCAACCAGGGAGCCGAGGGAGTTCGATTCATGTTTAGAACTTGGTGAGGAAAGTGACAAAGAAGTCACTGCTGTTTCCGTGGATAGTATTTTGCCTGATGAACTGTTGGAACGTATCATAGCCTATCTTCCCATTGCAAGCATCTTCAGAGCTGGTTGTGTCTGTAAGAGATGGCACGAAATTGTTACCTCAAAGAGGTTTCTGTGGAATCTTTCACATGTGCTTCCACAGAAACCTTGGTACTTTATGTTTACAAGCTTTGATGAGCCAACTGGTTATGCTTATGATCCCATCCTTAGGAAATGGTATGGCATCGAACTTCCCTGCATTGACACTTCTAATTGGTTCATTGCATCCTCGTGTGGTTTAGTTTGCTTCATGGACAACAACAATCGAAGTGAATTATTCGTGTGCAACCCCATTACTAAAATCTATAAGAAGCTCGAGGGCCCCCCCGGTTCTGACTTTTCCGAGTACAGTGCATTGGCAATTTCGGTAAACAGAGCATCACAAAGTTACACAGTGGCTATTGTGAAATCAAAGGAAGTGCCTGAGAACTTCTCCCAATCTGTTCTTTCAATTCATATATACAATTCAGAAGATGAGACATGGGTGACCAGTTTAACAGAGGTTTTGATAGGGTGGAGAGGCGGTGATGAGAGTGTGATGTGTAATGGGGTGCTGTACTTTTTGGTTTATTCAACCGGGGCTGGCCATCCAGAGAACCGACACGCCCTCGTTGCGTATAACATCACCAACCATTCATCTCAGCGATCTCTGGCAAAGAGCTTCATTCCAATATCTTGTCCTCTAACATGTGGTCGGCTGATGAATTTGAAGGAGAAGCTTGTAATGGTGGGAGGTCTTGGCAAACGTGACCGGCCTGACATTATAAAAGGGATTGGTATATGGGTGCTAAACAACGGGAAATGGGATGAACTTGCTCGTGTGCCCCACAAATTCTTTCAAGGATTCGGAGAGTTGGACGATGTCTTTGCAAGCAGTGGTACAGATGATCTCATATATATTCAAAGCTATGGAGCTTCAGCACTTCTCACATATGACATGAACCATAAACATTGGAGATGGTCACAGAAGTGTCCAGTGACAAAAAGGTTTCCCCTGCAGCTCTTCACTGGGTTTTGCTTTGAACCCAGGCTTGAAATTGCTCCTTAA 1218 0.4417 MAGETSWIIPYLDNATREPREFDSCLELGEESDKEVTAVSVDSILPDELLERIIAYLPIASIFRAGCVCKRWHEIVTSKRFLWNLSHVLPQKPWYFMFTSFDEPTGYAYDPILRKWYGIELPCIDTSNWFIASSCGLVCFMDNNNRSELFVCNPITKIYKKLEGPPGSDFSEYSALAISVNRASQSYTVAIVKSKEVPENFSQSVLSIHIYNSEDETWVTSLTEVLIGWRGGDESVMCNGVLYFLVYSTGAGHPENRHALVAYNITNHSSQRSLAKSFIPISCPLTCGRLMNLKEKLVMVGGLGKRDRPDIIKGIGIWVLNNGKWDELARVPHKFFQGFGELDDVFASSGTDDLIYIQSYGASALLTYDMNHKHWRWSQKCPVTKRFPLQLFTGFCFEPRLEIAP 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00221 405 CDD F-box_AtFBW1-like 43 81 - -
Accr7g00221 405 NCBIfam F-box protein interaction domain 135 356 IPR017451 -
Accr7g00221 405 SUPERFAMILY F-box domain 42 146 IPR036047 GO:0005515
Accr7g00221 405 FunFam F-box/kelch-repeat protein At3g61590 family 91 389 - -
Accr7g00221 405 ProSiteProfiles F-box domain profile. 39 86 IPR001810 GO:0005515
Accr7g00221 405 FunFam F-box/kelch-repeat protein At3g61590 38 85 - -
Accr7g00221 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Accr7g00221 405 SUPERFAMILY Galactose oxidase, central domain 106 383 IPR011043 -
Accr7g00221 405 PANTHER F-BOX FAMILY PROTEIN 25 402 IPR045048 -
Accr7g00221 405 Pfam F-box-like 45 84 IPR001810 GO:0005515
Accr7g00221 405 Gene3D - 34 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00221 Accr-Chr7 2864303 2865520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00221 - - gmx:100817678 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00221 7 2864303 2865520 Accr7g00221 7 2864303 2865520 ECH