Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00144 ATGTCTTCCCCTAGCAAGCGGCGAGAGATGGACTTGATGAAACTGATGATGAGTGATTATAAGGTGGAGATGATCAATGATGGAATGCAAGAGTTTTATGTGCATTTCCATGGACCCAACGACAGTCCTTACCATGATGGTGTTTGGAAAGTAAGAGTTGAACTGCCTGATGCTTATCCCTATAAATCACCCTCCATAGGATTTGTCAATAAGATCTACCACCCAAATGTTGATGAGATGTCAGGTTCAGTTTGTCTGGATGTTATCAATCAAACCTGGAGCCCCATGTTTGATCTTGTTAATGTATTTGAGGTGTTTCTACCGCAACTTCTTTTGTATCCCAACCCATCTGACCCCCTGAATGGAGAAGCTGCAGCTTTAATGATGCGTGACCGAGCTGCTTATGAACAAAGGGTTAAAGAATTCTGCAAGAAGTATGCGAAGCCAGAAGACATAGGAGCTGTTGCAGAAGAGAAATCCAGCAGCGATGAGGAGCTGACTGAAGACGAATATGATTCCAGCGATGAGCAGGTGGCTGGTAAAGCTGACCCGTAG 555 0.4432 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPNDSPYHDGVWKVRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRAAYEQRVKEFCKKYAKPEDIGAVAEEKSSSDEELTEDEYDSSDEQVAGKADP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00144 184 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 29 136 - -
Accr7g00144 184 SUPERFAMILY UBC-like 4 148 IPR016135 -
Accr7g00144 184 CDD UBCc 7 143 IPR000608 -
Accr7g00144 184 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Accr7g00144 184 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 148 IPR000608 -
Accr7g00144 184 Pfam Ubiquitin-conjugating enzyme 10 142 IPR000608 -
Accr7g00144 184 Gene3D Ubiquitin Conjugating Enzyme 1 160 IPR016135 -
Accr7g00144 184 SMART ubc_7 4 148 - -
Accr7g00144 184 FunFam Ubiquitin-conjugating enzyme 5, E2 1 159 - -
Accr7g00144 184 MobiDBLite consensus disorder prediction 153 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00144 Accr-Chr7 1690245 1692990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00144 3 115 Miscellaneous Gene Families AT3G17000 23.140 6.15e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00144 K10576 - gmx:548025 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00144 7 1690245 1692990 Accr7g00144 7 1690245 1692990 ECH