Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01567 ATGGCGGCAGAGCCACCGCCTCCGCAGTCGGAGATCCACCTTAGGATTAATTCTCGGAAGAACGACAATGTCGTACACCCAGCTGAGGCAGGCGCGGCTTTGCCTTATTCAACAAGTAGAACGCCAGTAGAATACACCGAAGAGAAGCATTTTAAGAGATGGTTTCCCTGGTTAATTCCTTTCATTGTTATTGCCAACATCGTTGTGTTTGTAATTACCATGTACGTCAACAATTGCCCCAAAAACTCTGTTTCTTGCATTGCTCGCTTCCTCGGTCGTTTCTCCTTTCAGCCGCTCAAAGAAAACCCTCTTCTTGGGCCTTCTTCATTAACGCTACAGAAGATGGGAGCTCTTGATGTAGGTAGAGTGGTTCACAGACACCAGGGCTGGCGCCTTATAACTTGCATATGGTTACATGGTGGCGTCTTTCATATATTGGCAAATATGTTGGGTATTCTGATCATTGGGATCCGGCTTGAGCAAGAATTTGGATTCTTGCGTATTGGATTGCTATTTTTGATTTCTGGATTTGGGGGAAGTTTGCTTTCTGCTCTATTCATTCAGTCAAACATCTCTGTGGGTGCCTCTGGGGCTCTTTTTGGATTGCTGGGAGCCATGCTTTCTGAACTCATTACTAATTGGTCTATGTATGATAACAAGTTTGCAGCACTCTTCACTCTTGTGATTATCGTTGCAGTCAATCTAGTAGTAGGGATCCTCCCACATGTGGACAATTTTGCTCATATTGGAGGGTTTATTACAGGATTTCTTCTTGGATTTGTGTTTCTAATCCGTCCTCAGTTTGGCTGGTTTAAACAAAGATATGCTTCTCCTGGCTACTCTTCTGCTCCAGTTAGATCTAAGTTCAAAAAATATCAGTGCATCTTATGGATCCTCTCTCTGATCCTTGTTATTGCTGGAATTACTGTTGGCCTTATTGCACTTCTCCGTGGTGTTGATGCCAATGATCATTGTTCTTGGTGCCATTATCTATCTTGTGTCCCAACTTCAAGATGGAGCTGCAATACCGAACCTGCATCTTGTTTTACAAGCCAACTTGGTAGTCAGCTGAATGTAACTTGCTCAACCAATGGGAAATCCAATACATATTCGATTCCAGATCCAACCGATTCAAAGATCCAGCAGTTATGCTCTCAGCTTTGTACTTGA 1170 0.4342 MAAEPPPPQSEIHLRINSRKNDNVVHPAEAGAALPYSTSRTPVEYTEEKHFKRWFPWLIPFIVIANIVVFVITMYVNNCPKNSVSCIARFLGRFSFQPLKENPLLGPSSLTLQKMGALDVGRVVHRHQGWRLITCIWLHGGVFHILANMLGILIIGIRLEQEFGFLRIGLLFLISGFGGSLLSALFIQSNISVGASGALFGLLGAMLSELITNWSMYDNKFAALFTLVIIVAVNLVVGILPHVDNFAHIGGFITGFLLGFVFLIRPQFGWFKQRYASPGYSSAPVRSKFKKYQCILWILSLILVIAGITVGLIALLRGVDANDHCSWCHYLSCVPTSRWSCNTEPASCFTSQLGSQLNVTCSTNGKSNTYSIPDPTDSKIQQLCSQLCT 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01567 389 FunFam RHOMBOID-like protein 52 265 - -
Accr6g01567 389 Gene3D - 49 265 IPR035952 -
Accr6g01567 389 SUPERFAMILY Rhomboid-like 53 267 IPR035952 -
Accr6g01567 389 PANTHER RHOMBOID-RELATED 36 341 IPR002610 GO:0004252|GO:0006508|GO:0016020
Accr6g01567 389 Pfam Rhomboid family 124 265 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01567 Accr-Chr6 48615947 48619409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01567 - - gmx:100801675 565.074