Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr6g01438 | ATGTATTCTGATCGTGTGGAGACTGGAGCGAGGAGGTCAGTAAAGGAACGGCTTAATGGGAATTTTGCTAGTGACTCTACCCGCCCGCGACAAATCACTGGAAAGAGGCAGAGACAAGATGACAAATGGGAGCACGATCTTTTTGAGGATGGCGAGGCACGAGTTTCTAAACGCCAAGTTGGTGGTCATGATCTCCGCCAGAAGCTTCAGAAAAAGGGCCTTCAACCAGCTTCCCAGCGTGGAAAGAATTCTGCTCCAGGCGTGCGTGATCTGCGTGAAAAGTTATCTGGAACAATGACTCAACAGCCTAGAAACTCAGATCCACCTAAGTCTAAGGTGGAAGCTGTTAAACCTAGCAGTAAAACTGCCATTGTTGAGGCTCCTGCACCAAATACTAAAAGAGCAACTAACCCAGCTCCCAAAAAGAAGACATCACAAAAGGCTGGTACTTCGGTGGATGAATTTTTGCATTCCCTGGGTCTAGAGAAGTATCTCATAACTTTTCAAGCTGAAGAAGTTGATATGACAGCTCTCATGCACATGACTGATGATGATCTCAAGGCTATGGGTATACCAATGGGGCCAAGGAAGAAGATACTTTTAGCTTTAGAGTCAAATGGTTGA | 624 | 0.4583 | MYSDRVETGARRSVKERLNGNFASDSTRPRQITGKRQRQDDKWEHDLFEDGEARVSKRQVGGHDLRQKLQKKGLQPASQRGKNSAPGVRDLREKLSGTMTQQPRNSDPPKSKVEAVKPSSKTAIVEAPAPNTKRATNPAPKKKTSQKAGTSVDEFLHSLGLEKYLITFQAEEVDMTALMHMTDDDLKAMGIPMGPRKKILLALESNG | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr6g01438 | 207 | MobiDBLite | consensus disorder prediction | 1 | 149 | - | - | |
| Accr6g01438 | 207 | Pfam | SAM domain (Sterile alpha motif) | 150 | 204 | IPR001660 | GO:0005515 | |
| Accr6g01438 | 207 | SUPERFAMILY | SAM/Pointed domain | 149 | 204 | IPR013761 | - | |
| Accr6g01438 | 207 | PANTHER | SCP160 | 109 | 203 | - | - | |
| Accr6g01438 | 207 | MobiDBLite | consensus disorder prediction | 31 | 70 | - | - | |
| Accr6g01438 | 207 | Gene3D | - | 149 | 206 | IPR013761 | - | |
| Accr6g01438 | 207 | CDD | SAM_superfamily | 151 | 204 | - | - | |
| Accr6g01438 | 207 | ProSiteProfiles | SAM domain profile. | 147 | 201 | IPR001660 | GO:0005515 | |
| Accr6g01438 | 207 | FunFam | Sterile alpha motif domain-containing protein | 149 | 207 | - | - | |
| Accr6g01438 | 207 | SMART | SAM_4 | 144 | 207 | IPR001660 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr6g01438 | Accr-Chr6 | 44628722 | 44632835 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr6g01438 | 37 | 205 | Glycosyltransferase | AT3G07170 | 62.722 | 1.06e-65 | 199 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr6g01438 | - | - | qsa:O6P43_026651 | 308.531 |