Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr6g01409 | ATGATGATGAAGGCAGCTCAGATTTTCCTCTCCTTCCTTCTTATCTCTACCCTAGCTTCTGCTAAGAAGGCCGCTGATGTGACGGAGTTACGGATTGGTGTGAAGCACAAACCAAAATCATGTGAAGTTCAGGCACATAAAGGTGACAGAGTCAAAGTACACTATCGGGGAAAACTTACTGATGGAACTGTTTTTGATTCTAGCTTTGAAAGAGATAGCCCAATTGAATTTGAGCTTGGTACTGGTCAAGTGATCAAAGGGTGGGACCAAGGATTATTGGGAATGTGTATTGGTGAGAAGCGCAAGTTACAAATACCAGCTAAACTTGGCTATGGAGAGCAGGGTTCCCCTCCGACTATTCCTGGTGGTGCAACACTCATTTTTGACACTGAACTCGTAGGAGTGAATGGGAAAACTTTAAGTGAAGAAAAGCCAGACTCTGAGCTTTAG | 450 | 0.4378 | MMMKAAQIFLSFLLISTLASAKKAADVTELRIGVKHKPKSCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERDSPIEFELGTGQVIKGWDQGLLGMCIGEKRKLQIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNGKTLSEEKPDSEL | 149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr6g01409 | 149 | SUPERFAMILY | FKBP-like | 36 | 141 | - | - | |
| Accr6g01409 | 149 | FunFam | Peptidylprolyl isomerase | 16 | 136 | - | - | |
| Accr6g01409 | 149 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 42 | 133 | IPR001179 | GO:0003755 | |
| Accr6g01409 | 149 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 48 | 136 | IPR001179 | GO:0003755 | |
| Accr6g01409 | 149 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 7 | 138 | IPR044609 | GO:0000413|GO:0003755|GO:0061077 | |
| Accr6g01409 | 149 | Gene3D | - | 16 | 136 | IPR046357 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr6g01409 | Accr-Chr6 | 44123659 | 44126898 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr6g01409 | 49 | 149 | Calmodulin-binding Proteins | AT3G25230 | 33.019 | 1.00e-06 | 45.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr6g01409 | K09569 | - | gmx:100305479 | 250.366 |