Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01072 ATGACTACCATGGAGAGCTTGATTGGGTTGGTGAACCGTATCCAGAGGGCTTGTACTGTCCTCGGTGACTATGGAGGTGGTGACGACACGTTTTCTTCTCTCTGGGAGGCTCTTCCTTCCGTTGCTGTAGTCGGCGGTCAGAGTTCCGGGAAGTCTTCCGTTTTGGAGAGTATTGTTGGTCGTGACTTCCTTCCCAGAGGGTCAGGGATAGTGACAAGACGTCCTTTGGTGCTGCAGCTTCATAAGACGGAGGAAGGATCGCAAGAATATGCCGAATTCCTTCACTTGCCAAGCAGAAAGTTCACTGACTTCTCCCTGGTTCGCCAGGAAATTCAGGATGAAACTGACAGAGTCACTGGAAAGAACAAACAAATATCTCCTATTCCAATTCATCTTAGCATCTATTCTCCAAATGTTGTCAACCTAACATTGATTGATTTACCGGGTTTGACCAAAGTTGCTGTAGAAGGACAGCCTGAGAGTGTTGTTCAAGACATTGAAATGATGGTTAGATCTTATGTTGAGAAGCCTAATTGCGTTATACTAGCAATATCTCCAGCCAATCAAGACATAGCAACTTCTGATGCTATTAAACTTTCCAGGGATGTGGATCCTACTGGTGAACGGACGTTTGGGGTGTTGACAAAGTTGGATTTGATGGATAAAGGAACAAATGCATTGGATGTCCTAGAAGGAAGATCTTATCGCTTGCAACATCCTTGGGTTGGTATTGTGAATCGATCCCAAGCAGATATCAATAAAAATCTTGATATGATTGCTGCTAGACGCAAGGAACGTGAGTACTTTGCCACCAGTCCTGACTATGGCCACTTAGTCAGTAAAATGGGTTCAGAGTACCTTGCAAAACTTCTATCACAGCACTTGGAGTCAGTAATCAGGGCACGGATACCTAGTATAACATCTTTGATTAACAAAAGCATTGATGAACTTGAATCAGAGATGGATCACCTTGGGAGACCCATTGCATCTGATGCTGGGGCTCAATTATATACCATACTGGAACTTTGCCGAGCATTTGATCGGATATTCAAGGAGCATTTAGATGGCGGGCGACCAGGAGGAGATAGGATATATAATGTCTTCGACAATCAGCTGCCTGCTGCTTTACGGAAGCTCCCATTTGACCGGCATCTTTCTATTCAGAATGTAAGGAGAGTGGTATCACAGGCTGATGGTTATCAGCCTCACTTAATTGCCCCAGAGCAAGGTTATCGGCGCTTGATTGAGGGGTCTCTTAATTACTTTCGGGGCCCAGCTGAAGCTTCAGTTGATGCTGTTCACTTTGTCTTGAAAGAACTTGTGAGAAAATCAATAGCTGAAACTCAGGAACTGAAGCGTTTTCCATCTGTTCAAGCTGAAATAGCTGCAGCTGCAAATGAGGCTTTAGAAAGATTCCGAGAAGAGAGTAAGAAGTGTACTATTCGGCTTGTTGACATGGAAGCTTCTTACCTGACCGTAGATTTCTTCCGGAAACTTCCACAAGAAATTGAGAAAACTGGAAATGTCAATACTGCGGCTGCTGCTACTGCTGCATCAATTGAGGATCGTTATTCAGAGGGCCACTTCAGGAGGATTGCATCAAACGTGTCATCCTACATAGGTTTGGTGGGAGATACCCTCAGGAACACCATTCCGAAGGCTGTTGTTTATTGTCAGGTCAGAGAAGCAAAACATTCCCTGCTAAACCACTTCTACATACAAATAGGGAAGAAGGAGGGTAAGCAGCTATCACAATTGTTAGACGAAGACCCTGCATTAATGGAGAGGAGAATGCAATGTGCGAAAAGGCTTGAACTGTACAAAGCAGCGAGGGATGAAATCGATTCTGTCTCATGGGCACGTTGA 1866 0.4459 MTTMESLIGLVNRIQRACTVLGDYGGGDDTFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTEEGSQEYAEFLHLPSRKFTDFSLVRQEIQDETDRVTGKNKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPESVVQDIEMMVRSYVEKPNCVILAISPANQDIATSDAIKLSRDVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNLDMIAARRKEREYFATSPDYGHLVSKMGSEYLAKLLSQHLESVIRARIPSITSLINKSIDELESEMDHLGRPIASDAGAQLYTILELCRAFDRIFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPFDRHLSIQNVRRVVSQADGYQPHLIAPEQGYRRLIEGSLNYFRGPAEASVDAVHFVLKELVRKSIAETQELKRFPSVQAEIAAAANEALERFREESKKCTIRLVDMEASYLTVDFFRKLPQEIEKTGNVNTAAAATAASIEDRYSEGHFRRIASNVSSYIGLVGDTLRNTIPKAVVYCQVREAKHSLLNHFYIQIGKKEGKQLSQLLDEDPALMERRMQCAKRLELYKAARDEIDSVSWAR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01072 621 FunFam dynamin-related protein 1E 4 313 - -
Accr6g01072 621 PRINTS Dynamin signature 205 221 IPR022812 -
Accr6g01072 621 PRINTS Dynamin signature 186 204 IPR022812 -
Accr6g01072 621 PRINTS Dynamin signature 228 247 IPR022812 -
Accr6g01072 621 PRINTS Dynamin signature 38 56 IPR022812 -
Accr6g01072 621 PRINTS Dynamin signature 63 80 IPR022812 -
Accr6g01072 621 PRINTS Dynamin signature 136 153 IPR022812 -
Accr6g01072 621 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 64 73 IPR019762 -
Accr6g01072 621 FunFam Dynamin-related protein 1C 335 597 - -
Accr6g01072 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 312 IPR027417 -
Accr6g01072 621 ProSiteProfiles GED domain profile. 529 621 IPR020850 -
Accr6g01072 621 Pfam Dynamin family 41 216 IPR045063 -
Accr6g01072 621 Pfam Dynamin GTPase effector domain 525 617 IPR003130 GO:0003924|GO:0005525
Accr6g01072 621 Pfam Dynamin central region 225 492 IPR000375 -
Accr6g01072 621 CDD DLP_1 38 304 IPR001401 GO:0003924|GO:0005525
Accr6g01072 621 Gene3D Dynamin, middle domain 337 597 - -
Accr6g01072 621 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 35 304 IPR030381 GO:0005525
Accr6g01072 621 SMART GED_2 524 617 IPR003130 GO:0003924|GO:0005525
Accr6g01072 621 Gene3D - 4 313 IPR027417 -
Accr6g01072 621 PANTHER DYNAMIN 5 617 IPR022812 -
Accr6g01072 621 SMART dynamin_3 4 255 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01072 Accr-Chr6 30323102 30332113 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01072 - - csv:101203934 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g01072 6 30323102 30332113 Accr6g01072 6 30323102 30332113 ECH