Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01033 ATGTCGACTTTCCATCTCCAATGTCAGACGCAACATCTGCGACCTCTGCCTCTTCCGAATCCGTTGCTCTATTCTAAACTGCGTGTTCCTCTCAATGCAACAACAACAACAACAACTACTTCCTTCAAACAGTATTCATCTAAAAATGGAGCCAAGGCAATTTTGACATCAGAACATCTTCCTCCTAATGCCCTTCGCCGCAAGAGAGACCCACAATGGAGGGGAGGCTTCAGCCTTGGACTCGACTTGGGATTGGCTCGCACGGGTCTTGCCCTCAGTAAAGGCTTCGCTGTTCGTCCATTAACGGTTTTGGAATTGCGTGGGCAGAAGCTTGAGGTTCAGCTTCTTAAGATTGCAGAACAGGAGGAAGCTGATGAGTTTATTGTTGGACTTCCTAAATCTTCTGATGGGAAGGAAACGCCACAATCAAACAAAGTTCGCAGCGTTGCAGGAAGGCTTGCAGTTCAAGCAGCAGAGAGGGGCTGGAGAGTGTATCTACAGGATGAACATGGGACAACAACAGAAGCAATCAATCGAATGATTAACATGGGCCTCAGCAAGTCCTCTCAGCAAAGAAAACTTGATGCTTTTGCAGCCGTGATGGTACTGGAGAGATATTTCCACTTGTCAGGTGAGGGTGTTGAACTTGTATTGCCCAAGAATCTTGATCTGCAGGAGAAACTTCAAAGGGGTCCTCCCAAAGACATTGATTTCTTGGATGAATTTGAGGGCTGA 735 0.468 MSTFHLQCQTQHLRPLPLPNPLLYSKLRVPLNATTTTTTTSFKQYSSKNGAKAILTSEHLPPNALRRKRDPQWRGGFSLGLDLGLARTGLALSKGFAVRPLTVLELRGQKLEVQLLKIAEQEEADEFIVGLPKSSDGKETPQSNKVRSVAGRLAVQAAERGWRVYLQDEHGTTTEAINRMINMGLSKSSQQRKLDAFAAVMVLERYFHLSGEGVELVLPKNLDLQEKLQRGPPKDIDFLDEFEG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01033 244 Pfam Holliday junction resolvase 78 207 IPR005227 GO:0006364
Accr6g01033 244 Hamap Putative pre-16S rRNA nuclease [yqgF]. 76 211 IPR005227 GO:0006364
Accr6g01033 244 CDD YqgF 79 208 IPR005227 GO:0006364
Accr6g01033 244 FunFam Holliday junction resolvase 78 215 - -
Accr6g01033 244 NCBIfam Holliday junction resolvase RuvX 79 207 IPR005227 GO:0006364
Accr6g01033 244 Gene3D - 78 213 IPR037027 GO:0006139
Accr6g01033 244 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 58 227 IPR005227 GO:0006364
Accr6g01033 244 SUPERFAMILY Ribonuclease H-like 77 208 IPR012337 -
Accr6g01033 244 SMART rnase_8s 76 176 IPR006641 GO:0006139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01033 - - gmx:100810356 320.472